Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC-0.18□□□□□ -2.44
APOBP04114 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.18□□□□□ -2.44
APOBP04114 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.18□□□□□ -2.44
APOBP04114 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.18□□□□□ -2.44
APOBP04114 AC091057.3-201ENST00000602684 733 ntBASIC-0.18□□□□□ -2.44
APOBP04114 AC055764.2-201ENST00000610089 670 ntBASIC-0.18□□□□□ -2.44
APOBP04114 AC009033.1-201ENST00000624279 431 ntBASIC-0.18□□□□□ -2.44
APOBP04114 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.18□□□□□ -2.44
APOBP04114 AL359854.1-201ENST00000614203 1594 ntBASIC-0.18□□□□□ -2.44
APOBP04114 SNORA51.10-201ENST00000384418 136 ntBASIC-0.18□□□□□ -2.44
APOBP04114 MIR1290-201ENST00000408735 78 ntBASIC-0.18□□□□□ -2.44
APOBP04114 MTATP6P16-201ENST00000434543 526 ntBASIC-0.18□□□□□ -2.44
APOBP04114 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC-0.18□□□□□ -2.44
APOBP04114 SNORD126-201ENST00000459475 77 ntBASIC-0.18□□□□□ -2.44
APOBP04114 AC125611.1-201ENST00000549563 229 ntBASIC-0.18□□□□□ -2.44
APOBP04114 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC-0.18□□□□□ -2.44
APOBP04114 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.18□□□□□ -2.44
APOBP04114 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.18□□□□□ -2.44
APOBP04114 SNORD115-3-201ENST00000363100 82 ntBASIC-0.18□□□□□ -2.44
APOBP04114 RNU6-439P-201ENST00000384188 106 ntBASIC-0.18□□□□□ -2.44
APOBP04114 RNA5SP219-201ENST00000390940 113 ntBASIC-0.18□□□□□ -2.44
APOBP04114 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.18□□□□□ -2.44
APOBP04114 AC025627.3-201ENST00000582078 182 ntBASIC-0.18□□□□□ -2.44
APOBP04114 ZNF92P3-201ENST00000596594 954 ntBASIC-0.18□□□□□ -2.44
APOBP04114 AC025449.1-201ENST00000603896 529 ntBASIC-0.18□□□□□ -2.44
APOBP04114 AC093648.1-201ENST00000623546 606 ntBASIC-0.18□□□□□ -2.44
APOBP04114 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.18□□□□□ -2.44
APOBP04114 MIR365A-201ENST00000362260 87 ntBASIC-0.18□□□□□ -2.44
APOBP04114 AL590383.1-201ENST00000428602 75 ntBASIC-0.18□□□□□ -2.44
APOBP04114 RAD1P2-201ENST00000446414 663 ntBASIC-0.18□□□□□ -2.44
APOBP04114 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.18□□□□□ -2.44
APOBP04114 FCF1P6-201ENST00000456841 595 ntBASIC-0.18□□□□□ -2.44
APOBP04114 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC-0.18□□□□□ -2.44
APOBP04114 AC022523.2-201ENST00000561045 150 ntBASIC-0.18□□□□□ -2.44
APOBP04114 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.18□□□□□ -2.44
APOBP04114 MIR3666-201ENST00000607845 111 ntBASIC-0.18□□□□□ -2.44
APOBP04114 AC092953.2-201ENST00000608000 699 ntBASIC-0.18□□□□□ -2.44
APOBP04114 MTCYBP29-201ENST00000436327 1006 ntBASIC-0.19□□□□□ -2.44
APOBP04114 TRBV8-1-201ENST00000481590 279 ntBASIC-0.19□□□□□ -2.44
APOBP04114 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.19□□□□□ -2.44
APOBP04114 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.19□□□□□ -2.44
APOBP04114 CYB5AP5-201ENST00000549779 389 ntBASIC-0.19□□□□□ -2.44
APOBP04114 AC008121.1-201ENST00000603244 268 ntBASIC-0.19□□□□□ -2.44
APOBP04114 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.19□□□□□ -2.44
APOBP04114 MTCO2P8-201ENST00000412213 658 ntBASIC-0.19□□□□□ -2.44
APOBP04114 RPS3AP1-201ENST00000413190 320 ntBASIC-0.19□□□□□ -2.44
APOBP04114 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC-0.19□□□□□ -2.44
APOBP04114 BX664727.1-201ENST00000416024 466 ntBASIC-0.19□□□□□ -2.44
APOBP04114 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.19□□□□□ -2.44
APOBP04114 AC104651.1-201ENST00000427559 735 ntBASIC-0.19□□□□□ -2.44
APOBP04114 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.19□□□□□ -2.44
APOBP04114 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC-0.19□□□□□ -2.44
APOBP04114 AL162395.1-201ENST00000457882 422 ntBASIC-0.19□□□□□ -2.44
APOBP04114 AC098869.1-201ENST00000481627 292 ntBASIC-0.19□□□□□ -2.44
APOBP04114 AC069304.2-201ENST00000605154 435 ntBASIC-0.19□□□□□ -2.44
APOBP04114 MIR1295B-201ENST00000636144 60 ntBASIC-0.19□□□□□ -2.44
APOBP04114 AC112487.2-201ENST00000637950 304 ntBASIC-0.19□□□□□ -2.44
APOBP04114 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
APOBP04114 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.19□□□□□ -2.44
APOBP04114 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.19□□□□□ -2.44
APOBP04114 RNU6ATAC13P-201ENST00000516152 131 ntBASIC-0.19□□□□□ -2.44
APOBP04114 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC-0.19□□□□□ -2.44
APOBP04114 AC090079.2-201ENST00000575289 768 ntBASIC-0.19□□□□□ -2.44
APOBP04114 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.19□□□□□ -2.44
APOBP04114 AL596245.1-201ENST00000618994 362 ntBASIC-0.19□□□□□ -2.44
APOBP04114 AC068647.2-201ENST00000637380 353 ntBASIC-0.19□□□□□ -2.44
APOBP04114 AC092447.10-201ENST00000620607 1652 ntBASIC-0.19□□□□□ -2.44
APOBP04114 SNORD114-9-201ENST00000364370 72 ntBASIC-0.2□□□□□ -2.44
APOBP04114 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.2□□□□□ -2.44
APOBP04114 AL353777.1-201ENST00000425552 326 ntBASIC-0.2□□□□□ -2.44
APOBP04114 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.2□□□□□ -2.44
APOBP04114 MIR4431-201ENST00000579990 94 ntBASIC-0.2□□□□□ -2.44
APOBP04114 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC-0.2□□□□□ -2.44
APOBP04114 AC009233.1-201ENST00000616477 371 ntBASIC-0.2□□□□□ -2.44
APOBP04114 AL590240.4-201ENST00000616908 390 ntBASIC-0.2□□□□□ -2.44
APOBP04114 MIR4320-201ENST00000636981 65 ntBASIC-0.2□□□□□ -2.44
APOBP04114 AL159152.1-201ENST00000635019 2587 ntBASIC-0.2□□□□□ -2.44
APOBP04114 RNU6-532P-201ENST00000384318 107 ntBASIC-0.2□□□□□ -2.44
APOBP04114 DSTNP4-201ENST00000399472 474 ntBASIC-0.2□□□□□ -2.44
APOBP04114 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.2□□□□□ -2.44
APOBP04114 AL353149.1-201ENST00000610667 244 ntBASIC-0.2□□□□□ -2.44
APOBP04114 AC011939.3-201ENST00000613686 466 ntBASIC-0.2□□□□□ -2.44
APOBP04114 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.2□□□□□ -2.44
APOBP04114 MIR196A2-201ENST00000385189 110 ntBASIC-0.2□□□□□ -2.44
APOBP04114 SNORA48.1-201ENST00000390879 135 ntBASIC-0.2□□□□□ -2.44
APOBP04114 RNA5SP222-201ENST00000411039 105 ntBASIC-0.2□□□□□ -2.44
APOBP04114 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.2□□□□□ -2.44
APOBP04114 RNU6-320P-201ENST00000516511 106 ntBASIC-0.2□□□□□ -2.44
APOBP04114 RNU2-12P-201ENST00000517216 168 ntBASIC-0.2□□□□□ -2.44
APOBP04114 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.2□□□□□ -2.44
APOBP04114 RNU6-486P-201ENST00000363116 107 ntBASIC-0.2□□□□□ -2.44
APOBP04114 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.2□□□□□ -2.44
APOBP04114 SNORD14D-201ENST00000384390 87 ntBASIC-0.2□□□□□ -2.44
APOBP04114 AC114482.1-201ENST00000418010 247 ntBASIC-0.2□□□□□ -2.44
APOBP04114 FABP5P14-201ENST00000437273 393 ntBASIC-0.2□□□□□ -2.44
APOBP04114 MTCO3P45-201ENST00000443036 613 ntBASIC-0.2□□□□□ -2.44
APOBP04114 RPS3AP17-201ENST00000472594 777 ntBASIC-0.2□□□□□ -2.44
APOBP04114 SNORA76.2-201ENST00000517095 137 ntBASIC-0.2□□□□□ -2.44
APOBP04114 HAUS1P3-201ENST00000523909 662 ntBASIC-0.2□□□□□ -2.44
APOBP04114 CYCSP27-201ENST00000527643 293 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms