Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 MIR5692A1-201ENST00000580523 69 ntBASIC1.45□□□□□ -2.18
MT-ND4P03905 BNIP3P25-201ENST00000596023 559 ntBASIC1.45□□□□□ -2.18
MT-ND4P03905 AL670379.2-201ENST00000604983 252 ntBASIC1.45□□□□□ -2.18
MT-ND4P03905 AC068944.2-201ENST00000610373 403 ntBASIC1.45□□□□□ -2.18
MT-ND4P03905 AC122133.1-201ENST00000613964 233 ntBASIC1.45□□□□□ -2.18
MT-ND4P03905 RMST_4.1-201ENST00000616886 107 ntBASIC1.45□□□□□ -2.18
MT-ND4P03905 AL359314.1-201ENST00000616913 261 ntBASIC1.45□□□□□ -2.18
MT-ND4P03905 AL159153.1-201ENST00000619688 317 ntBASIC1.45□□□□□ -2.18
MT-ND4P03905 AL603839.4-201ENST00000624658 1005 ntBASIC1.45□□□□□ -2.18
MT-ND4P03905 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MT-ND4P03905 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
MT-ND4P03905 snoU2_19.1-201ENST00000362361 80 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 RNU6-78P-201ENST00000362897 107 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 RNU6-116P-201ENST00000384042 109 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 SNORA70B-201ENST00000384210 135 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 SNORA40.19-201ENST00000390846 128 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 RAP1BP3-201ENST00000407180 549 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 MIR1283-2-201ENST00000408621 87 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 RNU6-387P-201ENST00000411331 105 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 BTF3L4P1-201ENST00000413813 468 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.44□□□□□ -2.18
MT-ND4P03905 MTND4P20-201ENST00000424125 869 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.44□□□□□ -2.18
MT-ND4P03905 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.44□□□□□ -2.18
MT-ND4P03905 PRELID3BP1-201ENST00000457142 540 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 AC006026.2-201ENST00000457376 180 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
MT-ND4P03905 AC104806.1-201ENST00000508720 308 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 MTCYBP40-201ENST00000509390 1135 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.44□□□□□ -2.18
MT-ND4P03905 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 RNU6-965P-201ENST00000516721 96 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.44□□□□□ -2.18
MT-ND4P03905 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.44□□□□□ -2.18
MT-ND4P03905 AC087883.1-201ENST00000551882 391 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.44□□□□□ -2.18
MT-ND4P03905 AC138649.3-201ENST00000622154 254 ntBASIC1.44□□□□□ -2.18
MT-ND4P03905 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
MT-ND4P03905 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MT-ND4P03905 MIR126-201ENST00000362291 85 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 SNORD114-1-201ENST00000362705 72 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 Y_RNA.367-201ENST00000365544 101 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 RNA5SP212-201ENST00000391223 107 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 RNU6-607P-201ENST00000411283 108 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 POLHP1-201ENST00000411806 470 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 CYCSP33-201ENST00000414485 327 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 OR6C66P-201ENST00000414917 930 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.43□□□□□ -2.18
MT-ND4P03905 CYCSP46-201ENST00000423569 204 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 BX510359.4-201ENST00000423750 193 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 USP9YP18-201ENST00000425912 695 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 ISCA1P6-201ENST00000427740 390 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 TOMM20P4-201ENST00000427861 435 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AC007969.2-201ENST00000441891 191 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 MTND2P4-201ENST00000445034 1004 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AC027575.1-201ENST00000481064 460 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.43□□□□□ -2.18
MT-ND4P03905 MTCYBP35-201ENST00000503630 1137 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AC008834.1-201ENST00000511612 175 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 RN7SKP256-201ENST00000517201 314 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AC022616.8-201ENST00000533569 253 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AC022880.1-201ENST00000534017 973 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AC022254.1-201ENST00000567857 235 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AC109446.2-201ENST00000567872 497 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 MIR4713-201ENST00000582691 75 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AC103810.8-201ENST00000607347 118 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AL360219.1-201ENST00000610230 366 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AC009318.2-201ENST00000610917 651 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AC008250.2-201ENST00000615261 205 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AC007792.1-201ENST00000623023 402 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 AC002543.1-201ENST00000299783 1954 ntBASIC1.43□□□□□ -2.18
MT-ND4P03905 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
MT-ND4P03905 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
MT-ND4P03905 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
MT-ND4P03905 RNU6-611P-201ENST00000384276 104 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 MIR583-201ENST00000384846 75 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 HMGN1P14-201ENST00000412459 517 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.42□□□□□ -2.18
MT-ND4P03905 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.42□□□□□ -2.18
MT-ND4P03905 HMGN2P3-201ENST00000433603 273 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 AC009961.2-201ENST00000435771 251 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 HMGN2P5-201ENST00000436882 273 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 AL022238.1-201ENST00000442557 355 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 RPL39P29-201ENST00000447779 157 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 GAPDHP17-201ENST00000449858 1001 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 UBL5P3-201ENST00000475112 231 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 RPL30P1-201ENST00000488676 339 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 AC096745.1-201ENST00000509945 370 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 MTND1P22-201ENST00000510572 951 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.42□□□□□ -2.18
MT-ND4P03905 RNU1-41P-201ENST00000516161 162 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 RNU1-48P-201ENST00000516400 162 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.42□□□□□ -2.18
MT-ND4P03905 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.42□□□□□ -2.18
MT-ND4P03905 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.42□□□□□ -2.18
MT-ND4P03905 MIR3915-201ENST00000578518 97 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.42□□□□□ -2.18
MT-ND4P03905 AC098848.2-201ENST00000588023 330 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms