Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN1O95832 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN1O95832 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CLDN1O95832 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN1O95832 RNA5SP139-201ENST00000364340 117 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 Y_RNA.301-201ENST00000364990 103 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 SNORD81.2-201ENST00000365153 76 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 RNU6-198P-201ENST00000384258 104 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 RNU6-658P-201ENST00000384606 106 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 MIR10A-201ENST00000385043 110 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CLDN1O95832 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 SNORD88.1-201ENST00000408684 91 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 RNA5SP492-201ENST00000411330 114 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 AL451074.5-201ENST00000415894 435 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN1O95832 AC007560.1-201ENST00000426912 237 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 RPL39P40-201ENST00000445481 146 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.43□□□□□ -2.02
CLDN1O95832 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.43□□□□□ -2.02
CLDN1O95832 AMD1P1-201ENST00000457220 922 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 snoU13.28-201ENST00000459235 104 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 RNU7-138P-201ENST00000459479 64 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 RPL7P43-201ENST00000478876 753 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 RAC1P5-201ENST00000512182 576 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 RNU6-507P-201ENST00000516045 100 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 Y_RNA.691-201ENST00000516611 103 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 AC069113.1-201ENST00000517763 267 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 AC109329.2-201ENST00000519658 482 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 AC243972.3-201ENST00000539655 198 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 AC087045.1-201ENST00000605856 382 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.43□□□□□ -2.02
CLDN1O95832 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.43□□□□□ -2.02
CLDN1O95832 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN1O95832 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CLDN1O95832 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN1O95832 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN1O95832 RPL9P7-201ENST00000330965 580 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 RNA5SP289-201ENST00000362332 137 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 Y_RNA.70-201ENST00000362886 110 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 Y_RNA.263-201ENST00000364659 114 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN1O95832 RNU6-128P-201ENST00000383976 107 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 SNORA32.2-201ENST00000384049 122 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 RNU6-72P-201ENST00000384285 79 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 RNU6-1009P-201ENST00000390996 107 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 AL365496.1-201ENST00000426885 215 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 MTND4LP16-201ENST00000440828 295 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 AL359672.1-201ENST00000442302 409 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 UBBP3-201ENST00000445497 241 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 Z96811.1-201ENST00000445880 108 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 HMGN2P10-201ENST00000448085 265 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 RPS29P20-201ENST00000489592 171 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN1O95832 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN1O95832 FGF7P4-201ENST00000509595 295 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN1O95832 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN1O95832 AC096725.1-201ENST00000514266 313 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 RNU6-256P-201ENST00000516747 97 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 AC087854.1-201ENST00000519706 414 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 COPS8P3-201ENST00000526024 482 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 HSPE1P20-201ENST00000538133 289 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 NACAP3-201ENST00000552100 481 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN1O95832 AC100830.2-201ENST00000581636 240 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN1O95832 HMGN2P15-201ENST00000585707 270 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 AC091135.1-201ENST00000585943 307 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 AC123912.5-201ENST00000605470 343 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN1O95832 uc_338.5-201ENST00000611839 155 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 AC093913.1-201ENST00000614178 329 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 AL138726.1-201ENST00000614873 333 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN1O95832 MIR7111-201ENST00000619751 72 ntBASIC2.42□□□□□ -2.02
CLDN1O95832 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN1O95832 MTND4P12-201ENST00000498999 1377 ntBASIC2.41□□□□□ -2.02
CLDN1O95832 Y_RNA.184-201ENST00000363884 108 ntBASIC2.41□□□□□ -2.02
CLDN1O95832 AL356057.3-201ENST00000402607 340 ntBASIC2.41□□□□□ -2.02
CLDN1O95832 AL356432.1-201ENST00000405809 419 ntBASIC2.41□□□□□ -2.02
CLDN1O95832 RAP1BP3-201ENST00000407180 549 ntBASIC2.41□□□□□ -2.02
CLDN1O95832 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN1O95832 VN1R36P-201ENST00000414936 291 ntBASIC2.41□□□□□ -2.02
CLDN1O95832 AL096701.2-201ENST00000416920 238 ntBASIC2.41□□□□□ -2.02
CLDN1O95832 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN1O95832 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN1O95832 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN1O95832 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN1O95832 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN1O95832 MTCO1P29-201ENST00000496868 288 ntBASIC2.41□□□□□ -2.02
CLDN1O95832 TBCAP3-201ENST00000512475 312 ntBASIC2.41□□□□□ -2.02
CLDN1O95832 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN1O95832 RNU7-30P-201ENST00000516835 62 ntBASIC2.41□□□□□ -2.02
CLDN1O95832 RNU6-1088P-201ENST00000516850 104 ntBASIC2.41□□□□□ -2.02
CLDN1O95832 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN1O95832 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.41□□□□□ -2.02
CLDN1O95832 AC022634.1-201ENST00000520765 532 ntBASIC2.41□□□□□ -2.02
CLDN1O95832 AP005597.4-201ENST00000526762 229 ntBASIC2.41□□□□□ -2.02
CLDN1O95832 AP000763.2-201ENST00000540641 163 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms