Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.29□□□□□ -2.2
CPSF4O95639 AC073614.1-201ENST00000438690 650 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.29□□□□□ -2.2
CPSF4O95639 ART2BP-201ENST00000453501 499 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.29□□□□□ -2.2
CPSF4O95639 MTCYBP1-201ENST00000454315 1119 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.29□□□□□ -2.2
CPSF4O95639 RNU2-53P-201ENST00000516257 147 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 Vault.3-201ENST00000516676 95 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 AC090572.1-201ENST00000519251 160 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 AC107953.1-201ENST00000522216 297 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.29□□□□□ -2.2
CPSF4O95639 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.29□□□□□ -2.2
CPSF4O95639 AC022880.1-201ENST00000534017 973 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 BNIP3P6-201ENST00000549284 499 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.29□□□□□ -2.2
CPSF4O95639 AC093249.1-201ENST00000567049 203 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 MIR4299-201ENST00000577899 72 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 AC098614.4-201ENST00000607601 462 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 AC008121.3-201ENST00000618726 433 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.29□□□□□ -2.2
CPSF4O95639 HAUS6P2-201ENST00000433254 2404 ntBASIC1.29□□□□□ -2.2
CPSF4O95639 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CPSF4O95639 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CPSF4O95639 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CPSF4O95639 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CPSF4O95639 RNU4-21P-201ENST00000362802 126 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 SNORD115-7-201ENST00000365306 82 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 RNU6-487P-201ENST00000365430 104 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 RNU5A-2P-201ENST00000384337 116 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 AC068050.1-201ENST00000394891 380 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 AC074117.2-201ENST00000417130 397 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.28□□□□□ -2.2
CPSF4O95639 AC096920.1-201ENST00000423991 241 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 ISCA1P6-201ENST00000427740 390 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 AC009961.2-201ENST00000435771 251 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 AL353689.1-201ENST00000438895 199 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.28□□□□□ -2.2
CPSF4O95639 AL022238.1-201ENST00000442557 355 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 AC010095.1-201ENST00000443543 144 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.28□□□□□ -2.2
CPSF4O95639 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.28□□□□□ -2.2
CPSF4O95639 SNRPFP4-201ENST00000456366 242 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.28□□□□□ -2.2
CPSF4O95639 SNORA43.2-201ENST00000516652 128 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 RNU6-548P-201ENST00000517083 115 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 AC109329.1-201ENST00000518744 317 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 AP005597.4-201ENST00000526762 229 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.28□□□□□ -2.2
CPSF4O95639 AC087883.1-201ENST00000551882 391 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 IMMP1LP2-201ENST00000552954 492 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.28□□□□□ -2.2
CPSF4O95639 AC073539.2-201ENST00000597113 165 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 uc_338.15-201ENST00000615470 191 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.28□□□□□ -2.2
CPSF4O95639 SCARNA4-202ENST00000625402 129 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.28□□□□□ -2.2
CPSF4O95639 WWP1P1-201ENST00000466609 2769 ntBASIC1.28□□□□□ -2.2
CPSF4O95639 ZNF72P-201ENST00000425869 1908 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 OR4G2P-201ENST00000328113 903 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 Y_RNA.40-201ENST00000362645 93 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 RNU6-1159P-201ENST00000362933 107 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 Y_RNA.367-201ENST00000365544 101 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CPSF4O95639 SNORA40.3-201ENST00000390964 122 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 MIR1261-201ENST00000408659 82 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 HMGN1P14-201ENST00000412459 517 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 C1DP2-201ENST00000418167 426 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.27□□□□□ -2.21
CPSF4O95639 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.27□□□□□ -2.21
CPSF4O95639 HMGB1P31-201ENST00000437242 427 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 AL445567.1-201ENST00000439121 144 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 AC104058.1-201ENST00000448028 297 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 GAPDHP17-201ENST00000449858 1001 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CPSF4O95639 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.27□□□□□ -2.21
CPSF4O95639 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.27□□□□□ -2.21
CPSF4O95639 AC104806.1-201ENST00000508720 308 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 MTND3P25-201ENST00000509243 135 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CPSF4O95639 RNU6-586P-201ENST00000517265 104 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 AC034114.1-201ENST00000520293 285 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 AC060788.1-201ENST00000521318 469 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 LRRC34P1-201ENST00000542742 915 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.27□□□□□ -2.21
CPSF4O95639 DNAJC19P9-201ENST00000555084 351 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 MIR3682-201ENST00000581338 84 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 AC098848.2-201ENST00000588023 330 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 AL031274.2-201ENST00000599419 203 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 AC005034.5-201ENST00000604219 466 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 ELOCP5-201ENST00000604924 333 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 Z99289.3-201ENST00000605586 594 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 AC005296.1-201ENST00000616145 209 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 AC026585.1-201ENST00000619582 524 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 AC091304.6-201ENST00000619761 202 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 RMST_7.1-201ENST00000621935 268 ntBASIC1.27□□□□□ -2.21
CPSF4O95639 AC138649.3-201ENST00000622154 254 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms