Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RPS29P13-201ENST00000402041 169 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.59□□□□□ -1.83
CNOT4O95628 AC099548.1-201ENST00000421443 426 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CNOT4O95628 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.59□□□□□ -1.83
CNOT4O95628 AC007560.1-201ENST00000426912 237 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 AL591043.1-201ENST00000432461 424 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.59□□□□□ -1.83
CNOT4O95628 MED28P2-201ENST00000475771 317 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 RNU7-175P-201ENST00000515915 61 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 RNU6-1338P-201ENST00000516328 91 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 RNU7-143P-201ENST00000516781 65 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.59□□□□□ -1.83
CNOT4O95628 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.59□□□□□ -1.83
CNOT4O95628 AC025627.2-201ENST00000576220 160 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 AL606490.9-201ENST00000603331 271 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 AC004792.1-201ENST00000614523 137 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 CR392039.5-201ENST00000623201 510 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 AC090617.7-201ENST00000623952 126 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CNOT4O95628 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CNOT4O95628 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CNOT4O95628 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.59□□□□□ -1.84
CNOT4O95628 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.59□□□□□ -1.84
CNOT4O95628 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CNOT4O95628 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.58□□□□□ -1.84
CNOT4O95628 RNU5E-7P-201ENST00000365290 117 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 EI24P2-201ENST00000397776 1076 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 MIR1251-201ENST00000408552 70 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 AC104332.1-201ENST00000440471 797 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 AL078601.1-201ENST00000444542 271 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.58□□□□□ -1.84
CNOT4O95628 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.58□□□□□ -1.84
CNOT4O95628 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.58□□□□□ -1.84
CNOT4O95628 AC139453.3-201ENST00000493276 369 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 ANXA2P1-201ENST00000505539 926 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.58□□□□□ -1.84
CNOT4O95628 RNU6-572P-201ENST00000516724 80 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 AC022868.1-201ENST00000517767 391 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.58□□□□□ -1.84
CNOT4O95628 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.58□□□□□ -1.84
CNOT4O95628 MIR3186-201ENST00000577404 85 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 AC020914.4-201ENST00000597690 277 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 AC136601.2-201ENST00000604356 474 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 Y_RNA.772-201ENST00000606692 102 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CNOT4O95628 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CNOT4O95628 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CNOT4O95628 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CNOT4O95628 MAPK10-373ENST00000641983 6772 ntBASIC3.58□□□□□ -1.84
CNOT4O95628 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
CNOT4O95628 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
CNOT4O95628 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CNOT4O95628 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.57□□□□□ -1.84
CNOT4O95628 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
CNOT4O95628 FTLP6-201ENST00000355274 422 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 RNU6-1266P-201ENST00000362794 105 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 Y_RNA.143-201ENST00000363520 106 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 Y_RNA.277-201ENST00000364754 102 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 RNU6-336P-201ENST00000364891 107 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.57□□□□□ -1.84
CNOT4O95628 MIR449B-201ENST00000384995 97 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 Y_RNA.581-201ENST00000391017 97 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CNOT4O95628 RPL23AP83-201ENST00000434984 473 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 AL133547.1-201ENST00000448546 220 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.57□□□□□ -1.84
CNOT4O95628 AL138752.1-201ENST00000452964 351 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.57□□□□□ -1.84
CNOT4O95628 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.57□□□□□ -1.84
CNOT4O95628 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
CNOT4O95628 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.57□□□□□ -1.84
CNOT4O95628 MIR5685-201ENST00000579080 79 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.57□□□□□ -1.84
CNOT4O95628 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.57□□□□□ -1.84
CNOT4O95628 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.57□□□□□ -1.84
CNOT4O95628 U4.7-201ENST00000638126 106 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CNOT4O95628 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.57□□□□□ -1.84
CNOT4O95628 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CNOT4O95628 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CNOT4O95628 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CNOT4O95628 AL359693.1-201ENST00000614959 2407 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.56□□□□□ -1.84
CNOT4O95628 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CNOT4O95628 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.56□□□□□ -1.84
CNOT4O95628 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.56□□□□□ -1.84
CNOT4O95628 ZNF962P-201ENST00000443465 3140 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 AL157777.2-201ENST00000258070 137 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CNOT4O95628 Y_RNA.16-201ENST00000362421 102 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 RNU6-525P-201ENST00000363685 104 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 Y_RNA.200-201ENST00000364018 102 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 RNU6-270P-201ENST00000364131 105 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 Y_RNA.269-201ENST00000364685 89 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CNOT4O95628 AL139156.1-201ENST00000412785 841 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms