Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNA5SP270-201ENST00000411361 118 ntBASIC2.37□□□□□ -2.03
SIX3O95343 CYCSP33-201ENST00000414485 327 ntBASIC2.37□□□□□ -2.03
SIX3O95343 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.37□□□□□ -2.03
SIX3O95343 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.37□□□□□ -2.03
SIX3O95343 MTATP6P26-201ENST00000445926 662 ntBASIC2.37□□□□□ -2.03
SIX3O95343 AL031274.1-201ENST00000450334 232 ntBASIC2.37□□□□□ -2.03
SIX3O95343 AC117503.1-201ENST00000472241 394 ntBASIC2.37□□□□□ -2.03
SIX3O95343 MTCO3P9-201ENST00000506989 781 ntBASIC2.37□□□□□ -2.03
SIX3O95343 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.37□□□□□ -2.03
SIX3O95343 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.37□□□□□ -2.03
SIX3O95343 AC093249.1-201ENST00000567049 203 ntBASIC2.37□□□□□ -2.03
SIX3O95343 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.37□□□□□ -2.03
SIX3O95343 SNORD14A-201ENST00000606526 91 ntBASIC2.37□□□□□ -2.03
SIX3O95343 RMST_7.1-201ENST00000621935 268 ntBASIC2.37□□□□□ -2.03
SIX3O95343 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.37□□□□□ -2.03
SIX3O95343 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SIX3O95343 ZNF271P-202ENST00000465539 1970 ntBASIC2.36□□□□□ -2.03
SIX3O95343 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SIX3O95343 Y_RNA.381-201ENST00000365666 102 ntBASIC2.36□□□□□ -2.03
SIX3O95343 RNU6-622P-201ENST00000384272 103 ntBASIC2.36□□□□□ -2.03
SIX3O95343 RNU6-1127P-201ENST00000384580 107 ntBASIC2.36□□□□□ -2.03
SIX3O95343 SNORA41-201ENST00000384675 132 ntBASIC2.36□□□□□ -2.03
SIX3O95343 RNU6-903P-201ENST00000391270 109 ntBASIC2.36□□□□□ -2.03
SIX3O95343 RNU2-23P-201ENST00000410545 195 ntBASIC2.36□□□□□ -2.03
SIX3O95343 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.36□□□□□ -2.03
SIX3O95343 AL590556.1-201ENST00000423231 483 ntBASIC2.36□□□□□ -2.03
SIX3O95343 AC008267.5-201ENST00000424928 265 ntBASIC2.36□□□□□ -2.03
SIX3O95343 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.36□□□□□ -2.03
SIX3O95343 RPL39P29-201ENST00000447779 157 ntBASIC2.36□□□□□ -2.03
SIX3O95343 AC108078.1-201ENST00000508073 725 ntBASIC2.36□□□□□ -2.03
SIX3O95343 RNU2-69P-201ENST00000516061 100 ntBASIC2.36□□□□□ -2.03
SIX3O95343 RN7SKP219-201ENST00000516825 296 ntBASIC2.36□□□□□ -2.03
SIX3O95343 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.36□□□□□ -2.03
SIX3O95343 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SIX3O95343 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.36□□□□□ -2.03
SIX3O95343 MTND4P7-201ENST00000523876 130 ntBASIC2.36□□□□□ -2.03
SIX3O95343 AL137161.1-201ENST00000532231 390 ntBASIC2.36□□□□□ -2.03
SIX3O95343 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.36□□□□□ -2.03
SIX3O95343 HIF1AP1-201ENST00000553642 175 ntBASIC2.36□□□□□ -2.03
SIX3O95343 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.36□□□□□ -2.03
SIX3O95343 AL713866.2-201ENST00000603579 219 ntBASIC2.36□□□□□ -2.03
SIX3O95343 AC107304.1-201ENST00000604229 296 ntBASIC2.36□□□□□ -2.03
SIX3O95343 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.36□□□□□ -2.03
SIX3O95343 AC104237.2-201ENST00000612456 443 ntBASIC2.36□□□□□ -2.03
SIX3O95343 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
SIX3O95343 AC009509.4-201ENST00000619202 509 ntBASIC2.36□□□□□ -2.03
SIX3O95343 AC139792.3-201ENST00000623525 224 ntBASIC2.36□□□□□ -2.03
SIX3O95343 Z69720.2-201ENST00000624755 279 ntBASIC2.36□□□□□ -2.03
SIX3O95343 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SIX3O95343 RNU6-1210P-201ENST00000363775 107 ntBASIC2.35□□□□□ -2.03
SIX3O95343 MIR196B-201ENST00000384852 84 ntBASIC2.35□□□□□ -2.03
SIX3O95343 MIR544A-201ENST00000384855 91 ntBASIC2.35□□□□□ -2.03
SIX3O95343 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.35□□□□□ -2.03
SIX3O95343 BTF3L4P1-201ENST00000413813 468 ntBASIC2.35□□□□□ -2.03
SIX3O95343 AIMP1P2-201ENST00000425294 312 ntBASIC2.35□□□□□ -2.03
SIX3O95343 CR769767.1-201ENST00000436337 346 ntBASIC2.35□□□□□ -2.03
SIX3O95343 NDUFA5P4-201ENST00000436704 385 ntBASIC2.35□□□□□ -2.03
SIX3O95343 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.35□□□□□ -2.03
SIX3O95343 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.35□□□□□ -2.03
SIX3O95343 Z83846.1-201ENST00000446798 265 ntBASIC2.35□□□□□ -2.03
SIX3O95343 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.35□□□□□ -2.03
SIX3O95343 AL163973.1-201ENST00000484753 577 ntBASIC2.35□□□□□ -2.03
SIX3O95343 AP001025.1-201ENST00000486139 332 ntBASIC2.35□□□□□ -2.03
SIX3O95343 AC068781.1-201ENST00000488231 618 ntBASIC2.35□□□□□ -2.03
SIX3O95343 MTND2P33-201ENST00000506452 1031 ntBASIC2.35□□□□□ -2.03
SIX3O95343 RNU6-405P-201ENST00000516637 110 ntBASIC2.35□□□□□ -2.03
SIX3O95343 AC109479.2-201ENST00000517842 174 ntBASIC2.35□□□□□ -2.03
SIX3O95343 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.35□□□□□ -2.03
SIX3O95343 AC118273.2-201ENST00000532092 465 ntBASIC2.35□□□□□ -2.03
SIX3O95343 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.35□□□□□ -2.03
SIX3O95343 AC087683.1-201ENST00000591187 441 ntBASIC2.35□□□□□ -2.03
SIX3O95343 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.35□□□□□ -2.03
SIX3O95343 AC078795.2-201ENST00000602835 1252 ntBASIC2.35□□□□□ -2.03
SIX3O95343 AL391646.1-201ENST00000603860 190 ntBASIC2.35□□□□□ -2.03
SIX3O95343 AC002044.1-201ENST00000606707 158 ntBASIC2.35□□□□□ -2.03
SIX3O95343 uc_338.34-201ENST00000617467 174 ntBASIC2.35□□□□□ -2.03
SIX3O95343 AL158209.2-201ENST00000619266 216 ntBASIC2.35□□□□□ -2.03
SIX3O95343 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SIX3O95343 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
SIX3O95343 AC007336.1-201ENST00000576365 3828 ntBASIC2.34□□□□□ -2.03
SIX3O95343 WWP1P1-201ENST00000466609 2769 ntBASIC2.34□□□□□ -2.03
SIX3O95343 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
SIX3O95343 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
SIX3O95343 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.34□□□□□ -2.03
SIX3O95343 RNU6-529P-201ENST00000363383 104 ntBASIC2.34□□□□□ -2.03
SIX3O95343 RNU6-1103P-201ENST00000384150 107 ntBASIC2.34□□□□□ -2.03
SIX3O95343 RNU6-1106P-201ENST00000390845 107 ntBASIC2.34□□□□□ -2.03
SIX3O95343 SNORA16.2-201ENST00000390991 127 ntBASIC2.34□□□□□ -2.03
SIX3O95343 RPL23AP36-201ENST00000413895 458 ntBASIC2.34□□□□□ -2.03
SIX3O95343 TPT1P7-201ENST00000458300 517 ntBASIC2.34□□□□□ -2.03
SIX3O95343 AC093534.1-201ENST00000504977 132 ntBASIC2.34□□□□□ -2.03
SIX3O95343 MTCYBP40-201ENST00000509390 1135 ntBASIC2.34□□□□□ -2.03
SIX3O95343 HMGB3P3-201ENST00000510526 400 ntBASIC2.34□□□□□ -2.03
SIX3O95343 RNU6-1053P-201ENST00000515930 101 ntBASIC2.34□□□□□ -2.03
SIX3O95343 SNORA31.15-201ENST00000516771 132 ntBASIC2.34□□□□□ -2.03
SIX3O95343 RNA5SP402-201ENST00000517148 110 ntBASIC2.34□□□□□ -2.03
SIX3O95343 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.34□□□□□ -2.03
SIX3O95343 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.34□□□□□ -2.03
SIX3O95343 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.34□□□□□ -2.03
SIX3O95343 AC009063.1-201ENST00000563342 702 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms