Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RPS3AP3-201ENST00000411933 242 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 AC074117.2-201ENST00000417130 397 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 MTND4P20-201ENST00000424125 869 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.57□□□□□ -2.16
SEMA3DO95025 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.57□□□□□ -2.16
SEMA3DO95025 ISCA1P6-201ENST00000427740 390 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 HMGB1P31-201ENST00000437242 427 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.57□□□□□ -2.16
SEMA3DO95025 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.57□□□□□ -2.16
SEMA3DO95025 MTCYBP1-201ENST00000454315 1119 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 HMGB1P35-201ENST00000503360 598 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 MTND3P25-201ENST00000509243 135 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 AC096745.1-201ENST00000509945 370 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.57□□□□□ -2.16
SEMA3DO95025 RNU6-667P-201ENST00000517186 102 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 AC109329.1-201ENST00000518744 317 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 IMMP1LP2-201ENST00000552954 492 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.57□□□□□ -2.16
SEMA3DO95025 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 MTATP6P24-201ENST00000576835 677 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 MIR3198-2-201ENST00000577868 80 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 MIR3683-201ENST00000580847 82 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 MIR4713-201ENST00000582691 75 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 AC011494.1-201ENST00000596454 237 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 CLIC4P2-201ENST00000601934 717 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 AC090578.1-201ENST00000604955 591 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 AC091834.1-201ENST00000614543 472 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 AC008250.2-201ENST00000615261 205 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 AL603839.4-201ENST00000624658 1005 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 SCARNA4-202ENST00000625402 129 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SEMA3DO95025 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SEMA3DO95025 HAUS6P2-201ENST00000433254 2404 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SEMA3DO95025 OR4G2P-201ENST00000328113 903 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.56□□□□□ -2.16
SEMA3DO95025 RNU6-212P-201ENST00000362642 104 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 SNORD56.1-201ENST00000362913 68 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 SNORD115-7-201ENST00000365306 82 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 RNU6-487P-201ENST00000365430 104 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 POLHP1-201ENST00000411806 470 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.56□□□□□ -2.16
SEMA3DO95025 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.56□□□□□ -2.16
SEMA3DO95025 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.56□□□□□ -2.16
SEMA3DO95025 MTCO3P5-201ENST00000433620 714 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.56□□□□□ -2.16
SEMA3DO95025 AC073614.1-201ENST00000438690 650 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 AC010095.1-201ENST00000443543 144 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 AC007677.1-201ENST00000445757 515 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.56□□□□□ -2.16
SEMA3DO95025 RPL30P12-201ENST00000474666 353 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 AL121594.1-201ENST00000475906 575 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 MTCO3P9-201ENST00000506989 781 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 Vault.3-201ENST00000516676 95 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 RNU6-685P-201ENST00000517088 95 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 AC090572.1-201ENST00000519251 160 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 AP003392.2-201ENST00000527269 208 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 CYCSP27-201ENST00000527643 293 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 AP005435.4-201ENST00000529514 284 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.56□□□□□ -2.16
SEMA3DO95025 MIR3915-201ENST00000578518 97 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 AC073539.2-201ENST00000597113 165 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 AC012360.2-201ENST00000609349 391 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 Z82243.1-201ENST00000609432 473 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 AL360219.1-201ENST00000610230 366 ntBASIC1.56□□□□□ -2.16
SEMA3DO95025 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.56□□□□□ -2.16
SEMA3DO95025 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.55□□□□□ -2.16
SEMA3DO95025 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SEMA3DO95025 RNU6-655P-201ENST00000362858 107 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 SNORD115-3-201ENST00000363100 82 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 RNU6-116P-201ENST00000384042 109 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 MIR518A2-201ENST00000384966 87 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 AL627390.1-201ENST00000396055 340 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 RNU2-48P-201ENST00000410694 191 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 RN7SKP101-201ENST00000411376 320 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 CYCSP46-201ENST00000423569 204 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 MTCYBP5-201ENST00000423752 1135 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.55□□□□□ -2.16
SEMA3DO95025 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.55□□□□□ -2.16
SEMA3DO95025 MTND2P4-201ENST00000445034 1004 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 AL360221.1-201ENST00000445989 335 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 AC104058.1-201ENST00000448028 297 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 AL133217.1-201ENST00000450980 425 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.55□□□□□ -2.16
SEMA3DO95025 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.55□□□□□ -2.16
SEMA3DO95025 AC104806.1-201ENST00000508720 308 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SEMA3DO95025 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.55□□□□□ -2.16
SEMA3DO95025 AP002453.2-201ENST00000533503 320 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 NDUFA5P6-201ENST00000542110 379 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 AC087883.1-201ENST00000551882 391 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.55□□□□□ -2.16
SEMA3DO95025 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.55□□□□□ -2.16
SEMA3DO95025 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.55□□□□□ -2.16
SEMA3DO95025 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.55□□□□□ -2.16
SEMA3DO95025 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SEMA3DO95025 AC026585.1-201ENST00000619582 524 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 RMST_7.1-201ENST00000621935 268 ntBASIC1.55□□□□□ -2.16
SEMA3DO95025 MIR126-201ENST00000362291 85 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms