Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC018692.3-201ENST00000623929 123 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 MIR3651-201ENST00000630427 90 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
VAMP4O75379 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.11□□□□□ -1.75
VAMP4O75379 MTND5P9-201ENST00000503854 1755 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VAMP4O75379 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
VAMP4O75379 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VAMP4O75379 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VAMP4O75379 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
VAMP4O75379 MIR521-1-201ENST00000384902 87 ntBASIC4.1□□□□□ -1.75
VAMP4O75379 RPL21P1-201ENST00000399532 476 ntBASIC4.1□□□□□ -1.75
VAMP4O75379 AC098614.2-201ENST00000426040 255 ntBASIC4.1□□□□□ -1.75
VAMP4O75379 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VAMP4O75379 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.1□□□□□ -1.75
VAMP4O75379 AC103996.1-201ENST00000555468 102 ntBASIC4.1□□□□□ -1.75
VAMP4O75379 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.1□□□□□ -1.75
VAMP4O75379 AC004584.2-201ENST00000570407 410 ntBASIC4.1□□□□□ -1.75
VAMP4O75379 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.1□□□□□ -1.75
VAMP4O75379 AC005046.1-201ENST00000608515 625 ntBASIC4.1□□□□□ -1.75
VAMP4O75379 uc_338.25-201ENST00000613756 156 ntBASIC4.1□□□□□ -1.75
VAMP4O75379 U2.1-201ENST00000618978 145 ntBASIC4.1□□□□□ -1.75
VAMP4O75379 MIR8062-201ENST00000621515 85 ntBASIC4.1□□□□□ -1.75
VAMP4O75379 AC027309.3-201ENST00000623419 351 ntBASIC4.1□□□□□ -1.75
VAMP4O75379 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VAMP4O75379 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.1□□□□□ -1.75
VAMP4O75379 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
VAMP4O75379 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.09□□□□□ -1.75
VAMP4O75379 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.09□□□□□ -1.75
VAMP4O75379 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.09□□□□□ -1.75
VAMP4O75379 Y_RNA.210-201ENST00000364161 110 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 RNA5SP387-201ENST00000364226 106 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 DEFB109C-201ENST00000382575 264 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 DEFB109B-201ENST00000382656 264 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 SNORA7.4-201ENST00000384249 137 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 SAR1AP2-201ENST00000392696 594 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 RPS29P13-201ENST00000402041 169 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 AC007098.1-201ENST00000420122 367 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 AC007560.1-201ENST00000426912 237 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 AC115115.1-201ENST00000449927 248 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 MTCO3P8-201ENST00000453691 755 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 AC109925.1-201ENST00000478069 331 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.09□□□□□ -1.75
VAMP4O75379 RNU6-1282P-201ENST00000516735 96 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 RNU6-703P-201ENST00000516946 107 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 AC006600.1-201ENST00000572529 153 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.09□□□□□ -1.75
VAMP4O75379 AC062037.2-201ENST00000610137 73 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 HMGB1P24-202ENST00000615653 685 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.09□□□□□ -1.75
VAMP4O75379 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.09□□□□□ -1.75
VAMP4O75379 U4.7-201ENST00000638126 106 ntBASIC4.09□□□□□ -1.75
VAMP4O75379 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.09□□□□□ -1.75
VAMP4O75379 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
VAMP4O75379 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
VAMP4O75379 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
VAMP4O75379 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.09□□□□□ -1.76
VAMP4O75379 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VAMP4O75379 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
VAMP4O75379 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VAMP4O75379 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VAMP4O75379 RNU6-700P-201ENST00000391043 107 ntBASIC4.08□□□□□ -1.76
VAMP4O75379 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
VAMP4O75379 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VAMP4O75379 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.08□□□□□ -1.76
VAMP4O75379 RPL30P10-201ENST00000488148 337 ntBASIC4.08□□□□□ -1.76
VAMP4O75379 AK3P2-201ENST00000507976 429 ntBASIC4.08□□□□□ -1.76
VAMP4O75379 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.08□□□□□ -1.76
VAMP4O75379 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.08□□□□□ -1.76
VAMP4O75379 RNU6-408P-201ENST00000515910 100 ntBASIC4.08□□□□□ -1.76
VAMP4O75379 RNU6-377P-201ENST00000515965 102 ntBASIC4.08□□□□□ -1.76
VAMP4O75379 RNA5SP468-201ENST00000516782 93 ntBASIC4.08□□□□□ -1.76
VAMP4O75379 RNU6-612P-201ENST00000516909 102 ntBASIC4.08□□□□□ -1.76
VAMP4O75379 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VAMP4O75379 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.08□□□□□ -1.76
VAMP4O75379 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.08□□□□□ -1.76
VAMP4O75379 AC091903.1-201ENST00000624322 454 ntBASIC4.08□□□□□ -1.76
VAMP4O75379 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
VAMP4O75379 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VAMP4O75379 AC073346.2-201ENST00000624724 2058 ntBASIC4.07□□□□□ -1.76
VAMP4O75379 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.07□□□□□ -1.76
VAMP4O75379 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.07□□□□□ -1.76
VAMP4O75379 RNU6-874P-201ENST00000362390 105 ntBASIC4.07□□□□□ -1.76
VAMP4O75379 SNORD50.1-201ENST00000362987 71 ntBASIC4.07□□□□□ -1.76
VAMP4O75379 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.07□□□□□ -1.76
VAMP4O75379 MTCO3P19-201ENST00000415864 321 ntBASIC4.07□□□□□ -1.76
VAMP4O75379 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.07□□□□□ -1.76
VAMP4O75379 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.07□□□□□ -1.76
VAMP4O75379 DYNLT3P2-201ENST00000442517 295 ntBASIC4.07□□□□□ -1.76
VAMP4O75379 RPS3AP12-201ENST00000443616 753 ntBASIC4.07□□□□□ -1.76
VAMP4O75379 FCF1P4-201ENST00000448326 183 ntBASIC4.07□□□□□ -1.76
VAMP4O75379 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VAMP4O75379 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.07□□□□□ -1.76
VAMP4O75379 RN7SL863P-201ENST00000462370 296 ntBASIC4.07□□□□□ -1.76
VAMP4O75379 RPS29P27-201ENST00000463711 170 ntBASIC4.07□□□□□ -1.76
VAMP4O75379 RNU1-61P-201ENST00000516107 151 ntBASIC4.07□□□□□ -1.76
VAMP4O75379 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
VAMP4O75379 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.07□□□□□ -1.76
VAMP4O75379 HMGB1P14-201ENST00000557424 591 ntBASIC4.07□□□□□ -1.76
VAMP4O75379 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms