Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 Y_RNA.288-201ENST00000364854 92 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 RNU6-746P-201ENST00000384112 109 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 RNU6-72P-201ENST00000384285 79 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 MT-TW-201ENST00000387382 68 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
GRIN3BO60391 RNU6-1197P-201ENST00000391183 107 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 AL357075.1-201ENST00000404107 726 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 RNA5SP39-201ENST00000411245 120 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.31□□□□□ -1.72
GRIN3BO60391 AL139281.1-201ENST00000422120 335 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 AC139712.2-201ENST00000424302 339 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
GRIN3BO60391 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.31□□□□□ -1.72
GRIN3BO60391 RN7SKP210-201ENST00000459176 261 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 RNU7-169P-201ENST00000459456 61 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 RPS26P15-201ENST00000488067 348 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 AC025465.3-201ENST00000510570 311 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 AC010265.1-201ENST00000513509 211 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 RNU6-1282P-201ENST00000516735 96 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 AC109329.1-201ENST00000518744 317 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 IGHV3-76-201ENST00000522465 295 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 OR5D17P-201ENST00000531492 978 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 AP004242.1-201ENST00000533701 349 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 AC008011.1-201ENST00000545989 227 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.31□□□□□ -1.72
GRIN3BO60391 RAC1P9-201ENST00000604990 392 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 AC243829.7-201ENST00000633081 225 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
GRIN3BO60391 AC007656.2-201ENST00000624902 4547 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
GRIN3BO60391 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
GRIN3BO60391 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
GRIN3BO60391 SNORA31-201ENST00000362607 130 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 Y_RNA.350-201ENST00000365409 98 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 RNU6-140P-201ENST00000384566 108 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 Y_RNA.592-201ENST00000410274 109 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 RNA5SP104-201ENST00000410989 118 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 AL606753.1-201ENST00000427435 87 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.3□□□□□ -1.72
GRIN3BO60391 OR2AQ1P-201ENST00000451972 200 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.3□□□□□ -1.72
GRIN3BO60391 RNU6-1132P-201ENST00000459214 107 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.3□□□□□ -1.72
GRIN3BO60391 FCF1P8-201ENST00000510322 597 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 RNA5SP208-201ENST00000516156 78 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 AL590705.4-201ENST00000532209 134 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.3□□□□□ -1.72
GRIN3BO60391 AL360157.1-201ENST00000565962 87 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 MIR4782-201ENST00000577987 79 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 AL390123.1-201ENST00000603216 237 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 MTND4LP5-201ENST00000605152 292 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 AC004825.2-201ENST00000616634 455 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 FTX_2.1-201ENST00000618816 94 ntBASIC4.3□□□□□ -1.72
GRIN3BO60391 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
GRIN3BO60391 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.3□□□□□ -1.72
GRIN3BO60391 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.3□□□□□ -1.72
GRIN3BO60391 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.29□□□□□ -1.72
GRIN3BO60391 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.29□□□□□ -1.72
GRIN3BO60391 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
GRIN3BO60391 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
GRIN3BO60391 RNU6-78P-201ENST00000362897 107 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 RNU6-336P-201ENST00000364891 107 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 RNU6-217P-201ENST00000384164 104 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 SNORA51.11-201ENST00000384442 131 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 MIR628-201ENST00000385229 95 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 RNA5SP494-201ENST00000410653 129 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 AP000275.1-201ENST00000411943 390 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 ELOCP20-201ENST00000422460 345 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 MTND3P9-201ENST00000429526 346 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 VDAC1P3-201ENST00000434069 851 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 MTND5P15-201ENST00000434246 349 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 NDUFB4P6-201ENST00000436819 366 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 MTATP6P7-201ENST00000453315 681 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 SNORD127-201ENST00000458892 86 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 UBL5P3-201ENST00000475112 231 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 AC034114.1-201ENST00000520293 285 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
GRIN3BO60391 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.29□□□□□ -1.72
GRIN3BO60391 RPS29P30-201ENST00000600975 111 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.29□□□□□ -1.72
GRIN3BO60391 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.29□□□□□ -1.72
GRIN3BO60391 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.29□□□□□ -1.72
GRIN3BO60391 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
GRIN3BO60391 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.29□□□□□ -1.72
GRIN3BO60391 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
GRIN3BO60391 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.29□□□□□ -1.72
GRIN3BO60391 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
GRIN3BO60391 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
GRIN3BO60391 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
GRIN3BO60391 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
GRIN3BO60391 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
GRIN3BO60391 RNU6-1159P-201ENST00000362933 107 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 Y_RNA.461-201ENST00000384263 103 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 RPL23AP48-201ENST00000406913 488 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 RNA5SP31-201ENST00000411144 127 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 AC004552.1-201ENST00000419089 348 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 PIGPP3-201ENST00000425307 415 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 RPL21P104-201ENST00000464143 478 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 RPS26P3-201ENST00000470205 348 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms