Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 Y_RNA.269-201ENST00000364685 89 ntBASIC3.7□□□□□ -1.82
SHOXO15266 RNU6-1145P-201ENST00000384246 107 ntBASIC3.7□□□□□ -1.82
SHOXO15266 MIR329-1-201ENST00000385028 80 ntBASIC3.7□□□□□ -1.82
SHOXO15266 RNU2-14P-201ENST00000411053 191 ntBASIC3.7□□□□□ -1.82
SHOXO15266 CYCSP48-201ENST00000417124 323 ntBASIC3.7□□□□□ -1.82
SHOXO15266 ARF4P2-201ENST00000430209 526 ntBASIC3.7□□□□□ -1.82
SHOXO15266 AC112220.1-201ENST00000434628 355 ntBASIC3.7□□□□□ -1.82
SHOXO15266 OR4C10P-201ENST00000434991 931 ntBASIC3.7□□□□□ -1.82
SHOXO15266 AC005154.2-201ENST00000438110 379 ntBASIC3.7□□□□□ -1.82
SHOXO15266 RPL26P26-201ENST00000480251 434 ntBASIC3.7□□□□□ -1.82
SHOXO15266 RPL36AP41-201ENST00000493820 306 ntBASIC3.7□□□□□ -1.82
SHOXO15266 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.7□□□□□ -1.82
SHOXO15266 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.7□□□□□ -1.82
SHOXO15266 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.7□□□□□ -1.82
SHOXO15266 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.7□□□□□ -1.82
SHOXO15266 MIR3934-201ENST00000579806 107 ntBASIC3.7□□□□□ -1.82
SHOXO15266 RNU6-91P-201ENST00000607774 107 ntBASIC3.7□□□□□ -1.82
SHOXO15266 AC010999.1-201ENST00000611856 324 ntBASIC3.7□□□□□ -1.82
SHOXO15266 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.7□□□□□ -1.82
SHOXO15266 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHOXO15266 MFSD8-242ENST00000641690 4199 ntBASIC3.7□□□□□ -1.82
SHOXO15266 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHOXO15266 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHOXO15266 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SHOXO15266 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.7□□□□□ -1.82
SHOXO15266 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHOXO15266 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.69□□□□□ -1.82
SHOXO15266 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHOXO15266 Y_RNA.83-201ENST00000363005 113 ntBASIC3.69□□□□□ -1.82
SHOXO15266 RNU1-18P-201ENST00000363062 164 ntBASIC3.69□□□□□ -1.82
SHOXO15266 Y_RNA.270-201ENST00000364693 104 ntBASIC3.69□□□□□ -1.82
SHOXO15266 Y_RNA.569-201ENST00000384749 103 ntBASIC3.69□□□□□ -1.82
SHOXO15266 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.69□□□□□ -1.82
SHOXO15266 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.69□□□□□ -1.82
SHOXO15266 AC245028.1-201ENST00000423259 256 ntBASIC3.69□□□□□ -1.82
SHOXO15266 RPS12P10-201ENST00000427031 377 ntBASIC3.69□□□□□ -1.82
SHOXO15266 COX6B1P7-201ENST00000430845 235 ntBASIC3.69□□□□□ -1.82
SHOXO15266 RNU7-23P-201ENST00000459465 62 ntBASIC3.69□□□□□ -1.82
SHOXO15266 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.69□□□□□ -1.82
SHOXO15266 SNORA40.9-201ENST00000515895 93 ntBASIC3.69□□□□□ -1.82
SHOXO15266 TRAV8-5-201ENST00000537369 341 ntBASIC3.69□□□□□ -1.82
SHOXO15266 CYP4A27P-201ENST00000567218 190 ntBASIC3.69□□□□□ -1.82
SHOXO15266 AC091042.1-201ENST00000579213 173 ntBASIC3.69□□□□□ -1.82
SHOXO15266 AL020997.2-201ENST00000602607 184 ntBASIC3.69□□□□□ -1.82
SHOXO15266 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.69□□□□□ -1.82
SHOXO15266 FTX_2.1-201ENST00000618816 94 ntBASIC3.69□□□□□ -1.82
SHOXO15266 U6.98-201ENST00000637157 84 ntBASIC3.69□□□□□ -1.82
SHOXO15266 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.69□□□□□ -1.82
SHOXO15266 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SHOXO15266 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
SHOXO15266 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.68□□□□□ -1.82
SHOXO15266 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SHOXO15266 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHOXO15266 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHOXO15266 AL590240.1-201ENST00000334118 313 ntBASIC3.68□□□□□ -1.82
SHOXO15266 RNU6-626P-201ENST00000363354 107 ntBASIC3.68□□□□□ -1.82
SHOXO15266 RNU6-873P-201ENST00000363833 107 ntBASIC3.68□□□□□ -1.82
SHOXO15266 Y_RNA.274-201ENST00000364714 101 ntBASIC3.68□□□□□ -1.82
SHOXO15266 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHOXO15266 Y_RNA.570-201ENST00000384750 101 ntBASIC3.68□□□□□ -1.82
SHOXO15266 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SHOXO15266 MIR298-201ENST00000401212 88 ntBASIC3.68□□□□□ -1.82
SHOXO15266 RNU4-61P-201ENST00000411243 107 ntBASIC3.68□□□□□ -1.82
SHOXO15266 AL139156.1-201ENST00000412785 841 ntBASIC3.68□□□□□ -1.82
SHOXO15266 RPL23AP36-201ENST00000413895 458 ntBASIC3.68□□□□□ -1.82
SHOXO15266 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.68□□□□□ -1.82
SHOXO15266 AC083863.1-201ENST00000438811 231 ntBASIC3.68□□□□□ -1.82
SHOXO15266 AC007395.1-201ENST00000451333 677 ntBASIC3.68□□□□□ -1.82
SHOXO15266 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.68□□□□□ -1.82
SHOXO15266 RPS23P7-201ENST00000466210 444 ntBASIC3.68□□□□□ -1.82
SHOXO15266 Y_RNA.683-201ENST00000516508 93 ntBASIC3.68□□□□□ -1.82
SHOXO15266 AP000867.2-201ENST00000532468 320 ntBASIC3.68□□□□□ -1.82
SHOXO15266 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHOXO15266 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.68□□□□□ -1.82
SHOXO15266 AC005176.2-201ENST00000596933 147 ntBASIC3.68□□□□□ -1.82
SHOXO15266 AC007546.2-201ENST00000623996 360 ntBASIC3.68□□□□□ -1.82
SHOXO15266 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.68□□□□□ -1.82
SHOXO15266 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHOXO15266 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.68□□□□□ -1.82
SHOXO15266 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SHOXO15266 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.68□□□□□ -1.82
SHOXO15266 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHOXO15266 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHOXO15266 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.67□□□□□ -1.82
SHOXO15266 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.67□□□□□ -1.82
SHOXO15266 Y_RNA.199-201ENST00000364014 102 ntBASIC3.67□□□□□ -1.82
SHOXO15266 RNU6-245P-201ENST00000384020 107 ntBASIC3.67□□□□□ -1.82
SHOXO15266 RNU6-20P-201ENST00000384106 107 ntBASIC3.67□□□□□ -1.82
SHOXO15266 RNU4-30P-201ENST00000410245 143 ntBASIC3.67□□□□□ -1.82
SHOXO15266 Y_RNA.793-201ENST00000411222 111 ntBASIC3.67□□□□□ -1.82
SHOXO15266 AC096649.2-201ENST00000416186 393 ntBASIC3.67□□□□□ -1.82
SHOXO15266 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.67□□□□□ -1.82
SHOXO15266 AC138623.1-201ENST00000418060 216 ntBASIC3.67□□□□□ -1.82
SHOXO15266 AL590762.4-201ENST00000425885 253 ntBASIC3.67□□□□□ -1.82
SHOXO15266 MTCO1P5-201ENST00000433573 344 ntBASIC3.67□□□□□ -1.82
SHOXO15266 AL714022.1-201ENST00000439897 151 ntBASIC3.67□□□□□ -1.82
SHOXO15266 TPT1P12-201ENST00000448968 492 ntBASIC3.67□□□□□ -1.82
SHOXO15266 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHOXO15266 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.67□□□□□ -1.82
SHOXO15266 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms