Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 OR5AK4P-201ENST00000635912 903 ntBASIC3.02□□□□□ -1.93
NPHP1O15259 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NPHP1O15259 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPHP1O15259 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-37P-201ENST00000362692 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-11P-201ENST00000364234 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 Y_RNA.255-201ENST00000364581 97 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-25P-201ENST00000383873 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-1-201ENST00000383898 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-48P-201ENST00000384161 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-36P-201ENST00000384172 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-4P-201ENST00000384205 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-5P-201ENST00000384238 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-3P-201ENST00000384314 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-16P-201ENST00000384385 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-15P-201ENST00000384534 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-2-201ENST00000384627 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-29P-201ENST00000384637 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-9-201ENST00000384776 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-33P-201ENST00000384793 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 MIR186-201ENST00000384988 86 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NPHP1O15259 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NPHP1O15259 AC016691.1-201ENST00000441321 413 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 AC133134.1-201ENST00000466800 359 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.01□□□□□ -1.93
NPHP1O15259 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NPHP1O15259 AC015712.3-201ENST00000559380 164 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 AC123912.5-201ENST00000605470 343 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 RNU6-6P-201ENST00000606623 107 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 uc_338.15-201ENST00000615470 191 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 AL158209.2-201ENST00000619266 216 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 MIR6863-201ENST00000636112 90 ntBASIC3.01□□□□□ -1.93
NPHP1O15259 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
NPHP1O15259 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NPHP1O15259 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
NPHP1O15259 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3□□□□□ -1.93
NPHP1O15259 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NPHP1O15259 RNA5SP456-201ENST00000364002 114 ntBASIC3□□□□□ -1.93
NPHP1O15259 SNORA25.6-201ENST00000364121 118 ntBASIC3□□□□□ -1.93
NPHP1O15259 RNU1-52P-201ENST00000384190 164 ntBASIC3□□□□□ -1.93
NPHP1O15259 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3□□□□□ -1.93
NPHP1O15259 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3□□□□□ -1.93
NPHP1O15259 RNU2-23P-201ENST00000410545 195 ntBASIC3□□□□□ -1.93
NPHP1O15259 RNU2-63P-201ENST00000410792 194 ntBASIC3□□□□□ -1.93
NPHP1O15259 AC016907.1-201ENST00000419483 435 ntBASIC3□□□□□ -1.93
NPHP1O15259 HMGN2P3-201ENST00000433603 273 ntBASIC3□□□□□ -1.93
NPHP1O15259 HMGN2P5-201ENST00000436882 273 ntBASIC3□□□□□ -1.93
NPHP1O15259 RPL37P25-201ENST00000507308 276 ntBASIC3□□□□□ -1.93
NPHP1O15259 RNU2-53P-201ENST00000516257 147 ntBASIC3□□□□□ -1.93
NPHP1O15259 AC104383.1-201ENST00000530297 370 ntBASIC3□□□□□ -1.93
NPHP1O15259 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3□□□□□ -1.93
NPHP1O15259 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3□□□□□ -1.93
NPHP1O15259 AC105137.2-201ENST00000569073 466 ntBASIC3□□□□□ -1.93
NPHP1O15259 MIR3670-2-201ENST00000582974 65 ntBASIC3□□□□□ -1.93
NPHP1O15259 MIR5092-201ENST00000583139 88 ntBASIC3□□□□□ -1.93
NPHP1O15259 MIR3670-1-201ENST00000584160 65 ntBASIC3□□□□□ -1.93
NPHP1O15259 MIR3670-3-201ENST00000584855 65 ntBASIC3□□□□□ -1.93
NPHP1O15259 AC002044.1-201ENST00000606707 158 ntBASIC3□□□□□ -1.93
NPHP1O15259 AC103810.6-201ENST00000606708 136 ntBASIC3□□□□□ -1.93
NPHP1O15259 MIR3670-4-201ENST00000612260 65 ntBASIC3□□□□□ -1.93
NPHP1O15259 AC093783.1-201ENST00000612976 329 ntBASIC3□□□□□ -1.93
NPHP1O15259 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3□□□□□ -1.93
NPHP1O15259 AC073534.2-201ENST00000620377 381 ntBASIC3□□□□□ -1.93
NPHP1O15259 AC068792.1-201ENST00000621354 417 ntBASIC3□□□□□ -1.93
NPHP1O15259 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3□□□□□ -1.93
NPHP1O15259 MIR1291-201ENST00000627649 87 ntBASIC3□□□□□ -1.93
NPHP1O15259 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NPHP1O15259 Y_RNA.40-201ENST00000362645 93 ntBASIC2.99□□□□□ -1.93
NPHP1O15259 RNU6-529P-201ENST00000363383 104 ntBASIC2.99□□□□□ -1.93
NPHP1O15259 Y_RNA.409-201ENST00000383990 98 ntBASIC2.99□□□□□ -1.93
NPHP1O15259 MIR95-201ENST00000385072 81 ntBASIC2.99□□□□□ -1.93
NPHP1O15259 AC007969.2-201ENST00000441891 191 ntBASIC2.99□□□□□ -1.93
NPHP1O15259 RNU7-167P-201ENST00000459160 62 ntBASIC2.99□□□□□ -1.93
NPHP1O15259 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHP1O15259 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHP1O15259 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHP1O15259 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.99□□□□□ -1.93
NPHP1O15259 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHP1O15259 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHP1O15259 MIR4424-201ENST00000585257 86 ntBASIC2.99□□□□□ -1.93
NPHP1O15259 RPL30P11-203ENST00000598995 310 ntBASIC2.99□□□□□ -1.93
NPHP1O15259 uc_338.34-201ENST00000617467 174 ntBASIC2.99□□□□□ -1.93
NPHP1O15259 U4atac.1-201ENST00000618345 95 ntBASIC2.99□□□□□ -1.93
NPHP1O15259 AC124864.2-201ENST00000624736 186 ntBASIC2.99□□□□□ -1.93
NPHP1O15259 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.99□□□□□ -1.93
NPHP1O15259 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
NPHP1O15259 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
NPHP1O15259 AP006437.1-201ENST00000641440 3685 ntBASIC2.98□□□□□ -1.93
NPHP1O15259 RNU6-266P-201ENST00000364225 107 ntBASIC2.98□□□□□ -1.93
NPHP1O15259 RNA5SP240-201ENST00000365355 128 ntBASIC2.98□□□□□ -1.93
NPHP1O15259 SNORD56-201ENST00000413522 71 ntBASIC2.98□□□□□ -1.93
NPHP1O15259 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.98□□□□□ -1.93
NPHP1O15259 AL161788.1-201ENST00000441805 169 ntBASIC2.98□□□□□ -1.93
NPHP1O15259 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.98□□□□□ -1.93
NPHP1O15259 snoU13.14-201ENST00000459372 104 ntBASIC2.98□□□□□ -1.93
NPHP1O15259 AC083798.1-201ENST00000472671 131 ntBASIC2.98□□□□□ -1.93
NPHP1O15259 RPL21P99-201ENST00000480369 423 ntBASIC2.98□□□□□ -1.93
NPHP1O15259 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms