Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.55□□□□□ -2
TO15178 MIR4765-201ENST00000585007 77 ntBASIC2.55□□□□□ -2
TO15178 AL359854.1-201ENST00000614203 1594 ntBASIC2.55□□□□□ -2
TO15178 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.55□□□□□ -2
TO15178 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.55□□□□□ -2
TO15178 AC006504.8-201ENST00000621046 635 ntBASIC2.55□□□□□ -2
TO15178 AC100810.6-201ENST00000638068 285 ntBASIC2.55□□□□□ -2
TO15178 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.55□□□□□ -2
TO15178 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.54□□□□□ -2
TO15178 AC080128.1-201ENST00000474389 1917 ntBASIC2.54□□□□□ -2
TO15178 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TO15178 MTND4P27-201ENST00000450813 1354 ntBASIC2.54□□□□□ -2
TO15178 RNU6-527P-201ENST00000363425 104 ntBASIC2.54□□□□□ -2
TO15178 MIR9-1-201ENST00000385198 89 ntBASIC2.54□□□□□ -2
TO15178 RNU6-1106P-201ENST00000390845 107 ntBASIC2.54□□□□□ -2
TO15178 MIR450B-201ENST00000401182 78 ntBASIC2.54□□□□□ -2
TO15178 AL590004.2-201ENST00000404787 371 ntBASIC2.54□□□□□ -2
TO15178 AC007064.1-201ENST00000412238 351 ntBASIC2.54□□□□□ -2
TO15178 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.54□□□□□ -2
TO15178 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.54□□□□□ -2
TO15178 USP9YP28-201ENST00000435142 589 ntBASIC2.54□□□□□ -2
TO15178 AC105272.1-201ENST00000438604 198 ntBASIC2.54□□□□□ -2
TO15178 AL031274.1-201ENST00000450334 232 ntBASIC2.54□□□□□ -2
TO15178 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.54□□□□□ -2
TO15178 AC133134.1-201ENST00000466800 359 ntBASIC2.54□□□□□ -2
TO15178 AC069439.1-201ENST00000494739 167 ntBASIC2.54□□□□□ -2
TO15178 FAM206BP-201ENST00000510179 541 ntBASIC2.54□□□□□ -2
TO15178 ELOCP31-201ENST00000540463 467 ntBASIC2.54□□□□□ -2
TO15178 PSMA3P-201ENST00000555485 635 ntBASIC2.54□□□□□ -2
TO15178 LARP7P3-201ENST00000579888 337 ntBASIC2.54□□□□□ -2
TO15178 AC060780.3-201ENST00000589464 80 ntBASIC2.54□□□□□ -2
TO15178 AC021646.1-201ENST00000605469 484 ntBASIC2.54□□□□□ -2
TO15178 FO624990.1-201ENST00000636373 85 ntBASIC2.54□□□□□ -2
TO15178 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.54□□□□□ -2
TO15178 RBBP8P1-201ENST00000449447 1844 ntBASIC2.54□□□□□ -2
TO15178 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TO15178 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.53□□□□□ -2
TO15178 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.53□□□□□ -2
TO15178 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.53□□□□□ -2
TO15178 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.53□□□□□ -2
TO15178 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.53□□□□□ -2
TO15178 SNORA67.1-201ENST00000364749 141 ntBASIC2.53□□□□□ -2
TO15178 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
TO15178 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
TO15178 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.53□□□□□ -2
TO15178 AL162578.1-201ENST00000406202 378 ntBASIC2.53□□□□□ -2
TO15178 RNA5SP390-201ENST00000410191 113 ntBASIC2.53□□□□□ -2
TO15178 COTL1P1-201ENST00000422309 375 ntBASIC2.53□□□□□ -2
TO15178 Z98742.2-201ENST00000431564 187 ntBASIC2.53□□□□□ -2
TO15178 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.53□□□□□ -2
TO15178 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.53□□□□□ -2
TO15178 AL359672.1-201ENST00000442302 409 ntBASIC2.53□□□□□ -2
TO15178 AC124916.1-201ENST00000444020 547 ntBASIC2.53□□□□□ -2
TO15178 AC013470.1-201ENST00000453438 462 ntBASIC2.53□□□□□ -2
TO15178 AP000705.1-201ENST00000454567 350 ntBASIC2.53□□□□□ -2
TO15178 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.53□□□□□ -2
TO15178 RPL7P43-201ENST00000478876 753 ntBASIC2.53□□□□□ -2
TO15178 RPL36AP48-201ENST00000485521 314 ntBASIC2.53□□□□□ -2
TO15178 AC023141.11-201ENST00000508864 202 ntBASIC2.53□□□□□ -2
TO15178 AF213884.2-201ENST00000510417 903 ntBASIC2.53□□□□□ -2
TO15178 SNORA31.23-201ENST00000517219 133 ntBASIC2.53□□□□□ -2
TO15178 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.53□□□□□ -2
TO15178 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.53□□□□□ -2
TO15178 AC079600.2-201ENST00000550076 130 ntBASIC2.53□□□□□ -2
TO15178 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.53□□□□□ -2
TO15178 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.53□□□□□ -2
TO15178 AL033523.1-201ENST00000605153 153 ntBASIC2.53□□□□□ -2
TO15178 AL160281.1-201ENST00000605307 311 ntBASIC2.53□□□□□ -2
TO15178 AL121917.1-203ENST00000605534 577 ntBASIC2.53□□□□□ -2
TO15178 AC090617.10-201ENST00000624308 134 ntBASIC2.53□□□□□ -2
TO15178 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
TO15178 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.52□□□□□ -2.01
TO15178 SNORD56.1-201ENST00000362913 68 ntBASIC2.52□□□□□ -2.01
TO15178 RNU6-254P-201ENST00000363377 107 ntBASIC2.52□□□□□ -2.01
TO15178 SNORA80A-201ENST00000363922 136 ntBASIC2.52□□□□□ -2.01
TO15178 RNU6-214P-201ENST00000384130 107 ntBASIC2.52□□□□□ -2.01
TO15178 AL360182.1-201ENST00000397433 468 ntBASIC2.52□□□□□ -2.01
TO15178 AL133475.1-201ENST00000404414 305 ntBASIC2.52□□□□□ -2.01
TO15178 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.52□□□□□ -2.01
TO15178 RNU6-1245P-201ENST00000411130 106 ntBASIC2.52□□□□□ -2.01
TO15178 AL117339.3-201ENST00000418733 162 ntBASIC2.52□□□□□ -2.01
TO15178 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.52□□□□□ -2.01
TO15178 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.52□□□□□ -2.01
TO15178 MICF-203ENST00000432679 129 ntBASIC2.52□□□□□ -2.01
TO15178 AC112220.1-201ENST00000434628 355 ntBASIC2.52□□□□□ -2.01
TO15178 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.52□□□□□ -2.01
TO15178 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.52□□□□□ -2.01
TO15178 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.52□□□□□ -2.01
TO15178 AC090525.1-201ENST00000479116 478 ntBASIC2.52□□□□□ -2.01
TO15178 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.52□□□□□ -2.01
TO15178 RNA5SP112-201ENST00000515937 99 ntBASIC2.52□□□□□ -2.01
TO15178 RNU6-1314P-201ENST00000517139 104 ntBASIC2.52□□□□□ -2.01
TO15178 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.52□□□□□ -2.01
TO15178 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.52□□□□□ -2.01
TO15178 AC025423.5-201ENST00000550230 219 ntBASIC2.52□□□□□ -2.01
TO15178 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.52□□□□□ -2.01
TO15178 AC018638.8-201ENST00000588755 281 ntBASIC2.52□□□□□ -2.01
TO15178 RPS15AP11-201ENST00000594193 385 ntBASIC2.52□□□□□ -2.01
TO15178 RBM11P1-201ENST00000604951 799 ntBASIC2.52□□□□□ -2.01
TO15178 BNIP3P10-201ENST00000605360 577 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms