Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LRRC34P2-201ENST00000514850 553 ntBASIC2.51□□□□□ -2.01
O00370 SNORA25.11-201ENST00000515935 105 ntBASIC2.51□□□□□ -2.01
O00370 ACA59.2-201ENST00000517061 156 ntBASIC2.51□□□□□ -2.01
O00370 AC021269.2-201ENST00000532318 330 ntBASIC2.51□□□□□ -2.01
O00370 AC010186.2-204ENST00000537668 439 ntBASIC2.51□□□□□ -2.01
O00370 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.51□□□□□ -2.01
O00370 AC078814.3-201ENST00000553036 491 ntBASIC2.51□□□□□ -2.01
O00370 AL157687.1-201ENST00000554853 619 ntBASIC2.51□□□□□ -2.01
O00370 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.51□□□□□ -2.01
O00370 AL391813.1-201ENST00000603098 260 ntBASIC2.51□□□□□ -2.01
O00370 MIR6134-201ENST00000617606 109 ntBASIC2.51□□□□□ -2.01
O00370 AL160394.1-201ENST00000624765 724 ntBASIC2.51□□□□□ -2.01
O00370 MIR1321-201ENST00000637766 79 ntBASIC2.51□□□□□ -2.01
O00370 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
O00370 AC005336.3-201ENST00000623833 2679 ntBASIC2.5□□□□□ -2.01
O00370 RNA5SP289-201ENST00000362332 137 ntBASIC2.5□□□□□ -2.01
O00370 RNU6-266P-201ENST00000364225 107 ntBASIC2.5□□□□□ -2.01
O00370 Y_RNA.295-201ENST00000364918 102 ntBASIC2.5□□□□□ -2.01
O00370 Y_RNA.378-201ENST00000365652 113 ntBASIC2.5□□□□□ -2.01
O00370 FTH1P15-201ENST00000406984 280 ntBASIC2.5□□□□□ -2.01
O00370 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.5□□□□□ -2.01
O00370 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.5□□□□□ -2.01
O00370 CALM1P1-201ENST00000442082 433 ntBASIC2.5□□□□□ -2.01
O00370 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.5□□□□□ -2.01
O00370 SCARNA3-201ENST00000517097 143 ntBASIC2.5□□□□□ -2.01
O00370 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.5□□□□□ -2.01
O00370 AL118558.2-201ENST00000556294 238 ntBASIC2.5□□□□□ -2.01
O00370 MIR5571-201ENST00000577998 113 ntBASIC2.5□□□□□ -2.01
O00370 MIR4446-201ENST00000578505 67 ntBASIC2.5□□□□□ -2.01
O00370 MIR4765-201ENST00000585007 77 ntBASIC2.5□□□□□ -2.01
O00370 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.5□□□□□ -2.01
O00370 U6atac.1-201ENST00000616025 117 ntBASIC2.5□□□□□ -2.01
O00370 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
O00370 FER-210ENST00000628534 558 ntTSL 5 BASIC2.5□□□□□ -2.01
O00370 MIR7157-201ENST00000635801 60 ntBASIC2.5□□□□□ -2.01
O00370 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
O00370 AC080100.1-201ENST00000624239 5356 ntBASIC2.5□□□□□ -2.01
O00370 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
O00370 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-37P-201ENST00000362692 107 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-11P-201ENST00000364234 107 ntBASIC2.49□□□□□ -2.01
O00370 Y_RNA.324-201ENST00000365165 102 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-25P-201ENST00000383873 107 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-1-201ENST00000383898 107 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-48P-201ENST00000384161 107 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-36P-201ENST00000384172 107 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-4P-201ENST00000384205 107 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-5P-201ENST00000384238 107 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-72P-201ENST00000384285 79 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-3P-201ENST00000384314 107 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-16P-201ENST00000384385 107 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-15P-201ENST00000384534 107 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-2-201ENST00000384627 107 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-29P-201ENST00000384637 107 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-9-201ENST00000384776 107 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-33P-201ENST00000384793 107 ntBASIC2.49□□□□□ -2.01
O00370 MIR518D-201ENST00000385014 87 ntBASIC2.49□□□□□ -2.01
O00370 MIR524-201ENST00000385242 87 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-607P-201ENST00000411283 108 ntBASIC2.49□□□□□ -2.01
O00370 CYCSP33-201ENST00000414485 327 ntBASIC2.49□□□□□ -2.01
O00370 CYCSP48-201ENST00000417124 323 ntBASIC2.49□□□□□ -2.01
O00370 Z98742.2-201ENST00000431564 187 ntBASIC2.49□□□□□ -2.01
O00370 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.49□□□□□ -2.01
O00370 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.49□□□□□ -2.01
O00370 FABP5P14-201ENST00000437273 393 ntBASIC2.49□□□□□ -2.01
O00370 RPL32P28-201ENST00000443577 397 ntBASIC2.49□□□□□ -2.01
O00370 HIGD1AP2-201ENST00000446367 280 ntBASIC2.49□□□□□ -2.01
O00370 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.49□□□□□ -2.01
O00370 MRPL42P6-201ENST00000486397 371 ntBASIC2.49□□□□□ -2.01
O00370 MTND4LP26-201ENST00000518144 282 ntBASIC2.49□□□□□ -2.01
O00370 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.49□□□□□ -2.01
O00370 AP004607.1-201ENST00000524456 203 ntBASIC2.49□□□□□ -2.01
O00370 AP000763.2-201ENST00000540641 163 ntBASIC2.49□□□□□ -2.01
O00370 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.49□□□□□ -2.01
O00370 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.49□□□□□ -2.01
O00370 LRRC37A5P-203ENST00000580181 585 ntBASIC2.49□□□□□ -2.01
O00370 VN1R80P-201ENST00000597126 338 ntBASIC2.49□□□□□ -2.01
O00370 AC008121.1-201ENST00000603244 268 ntBASIC2.49□□□□□ -2.01
O00370 AC091152.3-201ENST00000604227 325 ntBASIC2.49□□□□□ -2.01
O00370 AC087045.1-201ENST00000605856 382 ntBASIC2.49□□□□□ -2.01
O00370 RNU6-6P-201ENST00000606623 107 ntBASIC2.49□□□□□ -2.01
O00370 DISC2.1-201ENST00000612827 205 ntBASIC2.49□□□□□ -2.01
O00370 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.49□□□□□ -2.01
O00370 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.49□□□□□ -2.01
O00370 MIR3688-2-201ENST00000636963 87 ntBASIC2.49□□□□□ -2.01
O00370 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
O00370 CDC27P3-201ENST00000635418 1910 ntBASIC2.48□□□□□ -2.01
O00370 MTND5P30-201ENST00000452896 1731 ntBASIC2.48□□□□□ -2.01
O00370 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.48□□□□□ -2.01
O00370 AC131280.1-202ENST00000624067 4211 ntBASIC2.48□□□□□ -2.01
O00370 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
O00370 Y_RNA.89-201ENST00000363031 102 ntBASIC2.48□□□□□ -2.01
O00370 Y_RNA.256-201ENST00000364594 104 ntBASIC2.48□□□□□ -2.01
O00370 RNU6-38P-201ENST00000384085 107 ntBASIC2.48□□□□□ -2.01
O00370 Y_RNA.573-201ENST00000384763 105 ntBASIC2.48□□□□□ -2.01
O00370 AL445529.1-201ENST00000398713 389 ntBASIC2.48□□□□□ -2.01
O00370 RNU2-3P-201ENST00000410144 191 ntBASIC2.48□□□□□ -2.01
O00370 RNU6-908P-201ENST00000410160 94 ntBASIC2.48□□□□□ -2.01
O00370 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.48□□□□□ -2.01
O00370 EIF1P1-201ENST00000421436 341 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms