Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC109479.2-201ENST00000517842 174 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.13□□□□□ -2.07
SLC28A1O00337 HIF1AP1-201ENST00000553642 175 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 AC004223.2-201ENST00000590309 544 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 AC025165.5-201ENST00000602802 578 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 MIR6132-201ENST00000622083 109 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 AC097372.5-201ENST00000623665 376 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SLC28A1O00337 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
SLC28A1O00337 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SLC28A1O00337 RNU6-105P-201ENST00000363909 104 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 SNORA51.11-201ENST00000384442 131 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 MIR221-201ENST00000385135 110 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 RNU4-55P-201ENST00000410731 137 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 RNU6-1245P-201ENST00000411130 106 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.12□□□□□ -2.07
SLC28A1O00337 RPL39P29-201ENST00000447779 157 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.12□□□□□ -2.07
SLC28A1O00337 SNORA4.4-201ENST00000515921 135 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 RNU6-377P-201ENST00000515965 102 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 RNA5SP200-201ENST00000516360 103 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.12□□□□□ -2.07
SLC28A1O00337 MTCO3P23-201ENST00000561363 289 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 AGGF1P4-201ENST00000568249 801 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.12□□□□□ -2.07
SLC28A1O00337 MIR3941-201ENST00000582572 103 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 PIGPP4-201ENST00000584447 307 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 AC091135.1-201ENST00000585943 307 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 NBR2-204ENST00000587322 63 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 AC012507.3-201ENST00000603556 477 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 AC091805.2-201ENST00000603848 235 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 AL136363.2-201ENST00000604173 851 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 AC123912.5-201ENST00000605470 343 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 AC002044.1-201ENST00000606707 158 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 Z82243.1-201ENST00000609432 473 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
SLC28A1O00337 AC012640.5-201ENST00000623897 319 ntBASIC2.12□□□□□ -2.07
SLC28A1O00337 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SLC28A1O00337 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
SLC28A1O00337 SNORD23.1-201ENST00000408212 104 ntBASIC2.11□□□□□ -2.07
SLC28A1O00337 SNORD56-201ENST00000413522 71 ntBASIC2.11□□□□□ -2.07
SLC28A1O00337 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC28A1O00337 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC28A1O00337 EDDM3CP-201ENST00000415977 425 ntBASIC2.11□□□□□ -2.07
SLC28A1O00337 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SLC28A1O00337 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.11□□□□□ -2.07
SLC28A1O00337 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC28A1O00337 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.11□□□□□ -2.07
SLC28A1O00337 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.11□□□□□ -2.07
SLC28A1O00337 AC091133.4-201ENST00000511142 308 ntBASIC2.11□□□□□ -2.07
SLC28A1O00337 RNA5SP281-201ENST00000516504 135 ntBASIC2.11□□□□□ -2.07
SLC28A1O00337 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC28A1O00337 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.11□□□□□ -2.07
SLC28A1O00337 AP005136.1-201ENST00000579765 429 ntBASIC2.11□□□□□ -2.07
SLC28A1O00337 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC28A1O00337 U2.17-201ENST00000611454 95 ntBASIC2.11□□□□□ -2.07
SLC28A1O00337 AL354950.2-201ENST00000617939 290 ntBASIC2.11□□□□□ -2.07
SLC28A1O00337 AL159153.1-201ENST00000619688 317 ntBASIC2.11□□□□□ -2.07
SLC28A1O00337 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.11□□□□□ -2.07
SLC28A1O00337 AL136360.1-201ENST00000503377 1900 ntBASIC2.11□□□□□ -2.07
SLC28A1O00337 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SLC28A1O00337 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.1□□□□□ -2.07
SLC28A1O00337 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SLC28A1O00337 RNU6-266P-201ENST00000364225 107 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 U3.12-201ENST00000364498 214 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 U3.13-201ENST00000364804 214 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 Y_RNA.399-201ENST00000383955 105 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 RNU6-301P-201ENST00000384277 107 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 RNU6-1274P-201ENST00000384557 107 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 MIR544A-201ENST00000384855 91 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 AC073415.1-201ENST00000449240 153 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 RNU7-167P-201ENST00000459160 62 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 AP001486.1-201ENST00000463339 476 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 AC079804.2-201ENST00000490376 200 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 AC018868.1-201ENST00000491307 315 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 SNORA25.17-201ENST00000517184 124 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 AC069113.1-201ENST00000517763 267 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 AC034114.1-201ENST00000520293 285 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.1□□□□□ -2.07
SLC28A1O00337 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.1□□□□□ -2.07
SLC28A1O00337 AC022880.1-201ENST00000534017 973 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.1□□□□□ -2.07
SLC28A1O00337 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.1□□□□□ -2.07
SLC28A1O00337 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.1□□□□□ -2.07
SLC28A1O00337 RPS3AP23-202ENST00000574601 686 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.1□□□□□ -2.07
SLC28A1O00337 MIR5583-1-201ENST00000580941 59 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 MIR3162-201ENST00000581818 82 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 ELOCP5-201ENST00000604924 333 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 AC245008.1-201ENST00000608123 476 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SLC28A1O00337 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
SLC28A1O00337 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.1□□□□□ -2.07
SLC28A1O00337 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SLC28A1O00337 AL354685.2-201ENST00000448218 1447 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 Y_RNA.51-201ENST00000362725 102 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 RNU6-1222P-201ENST00000384615 107 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 MIR29B2-201ENST00000385055 81 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 RNU6-1158P-201ENST00000391167 107 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms