Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-648P-201ENST00000410190 107 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 MTND3P21-201ENST00000433774 331 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 PRPS1P1-201ENST00000445305 876 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 MTAPP1-201ENST00000489154 819 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU5B-3P-201ENST00000516601 115 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 SNORA25.17-201ENST00000517184 124 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 AL512360.1-201ENST00000555346 234 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 HMGB1P33-201ENST00000563485 527 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 MIR7843-201ENST00000622274 79 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 Z69720.2-201ENST00000624755 279 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 AL160394.1-201ENST00000624765 724 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 MIR203B-201ENST00000636080 86 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 AC080128.1-201ENST00000474389 1917 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-483P-201ENST00000384088 108 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 MIR504-201ENST00000385065 83 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 C8orf59P1-201ENST00000429930 303 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 Z98742.2-201ENST00000431564 187 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 RNA5SP401-201ENST00000515920 127 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 RNA5SP200-201ENST00000516360 103 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 SNORA43.2-201ENST00000516652 128 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 AP004607.1-201ENST00000524456 203 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 PRELID2P1-201ENST00000552837 301 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 TPRKBP2-201ENST00000565969 475 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 AC009831.4-201ENST00000620744 325 ntBASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NEDD8-MDP1E9PL57 MTND4P14-201ENST00000435799 1354 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 SNORD114-1-201ENST00000362705 72 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-38P-201ENST00000384085 107 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-843P-201ENST00000384454 104 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 Y_RNA.554-201ENST00000384672 102 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 MIR147B-201ENST00000390185 80 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 AL023284.1-201ENST00000403956 276 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 AL133475.1-201ENST00000404414 305 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 USP9YP27-201ENST00000418455 438 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-333P-201ENST00000459117 107 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 AP001025.1-201ENST00000486139 332 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-314P-201ENST00000516574 104 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 SCARNA16.3-201ENST00000516595 184 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 Y_RNA.704-201ENST00000516851 102 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 COX6CP5-201ENST00000527162 228 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 AC007336.1-201ENST00000576365 3828 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 MIR3117-201ENST00000584034 78 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 uc_338.34-201ENST00000617467 174 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 SCARNA4-202ENST00000625402 129 ntBASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU4-20P-201ENST00000365601 151 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 MIR181A1-201ENST00000385026 110 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AL079342.1-201ENST00000401460 267 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AL606923.1-201ENST00000406616 190 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 RAP1BP3-201ENST00000407180 549 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 MIR1289-2-201ENST00000408360 111 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-908P-201ENST00000410160 94 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 FABP5P14-201ENST00000437273 393 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AL445687.1-201ENST00000439946 251 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU7-167P-201ENST00000459160 62 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 MTCO3P38-201ENST00000468910 766 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 MED28P2-201ENST00000475771 317 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 MTCYBP40-201ENST00000509390 1135 ntBASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.22□□□□□ -2.05
NEDD8-MDP1E9PL57 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms