Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 SNORA70.24-201ENST00000517233 118 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 AC019159.1-201ENST00000605094 187 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 AC012603.1-201ENST00000606424 528 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 AC087190.4-201ENST00000574616 8334 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 AC110491.1-201ENST00000562191 2010 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UPK3BL1B0FP48 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4□□□□□ -1.77
UPK3BL1B0FP48 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UPK3BL1B0FP48 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4□□□□□ -1.77
UPK3BL1B0FP48 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UPK3BL1B0FP48 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
UPK3BL1B0FP48 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UPK3BL1B0FP48 DLEU2_6.3-201ENST00000340052 136 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 Y_RNA.16-201ENST00000362421 102 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 Y_RNA.54-201ENST00000362766 105 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 RNU4-90P-201ENST00000362773 141 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 RNA5SP399-201ENST00000364003 117 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 Y_RNA.277-201ENST00000364754 102 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 RNU6-1280P-201ENST00000365211 107 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4□□□□□ -1.77
UPK3BL1B0FP48 MTND2P29-201ENST00000438595 412 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 PRELID3BP1-201ENST00000457142 540 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 AP000870.1-201ENST00000472927 406 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 SERF1AP1-201ENST00000514575 187 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 IGKV2-38-201ENST00000517443 247 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4□□□□□ -1.77
UPK3BL1B0FP48 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4□□□□□ -1.77
UPK3BL1B0FP48 MIR5571-201ENST00000577998 113 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4□□□□□ -1.77
UPK3BL1B0FP48 AC020895.1-201ENST00000595362 272 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 AC073657.2-201ENST00000605661 303 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 DLEU2_6.2-201ENST00000620994 136 ntBASIC4□□□□□ -1.77
UPK3BL1B0FP48 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UPK3BL1B0FP48 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4□□□□□ -1.77
UPK3BL1B0FP48 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
UPK3BL1B0FP48 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4□□□□□ -1.77
UPK3BL1B0FP48 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4□□□□□ -1.77
UPK3BL1B0FP48 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
UPK3BL1B0FP48 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4□□□□□ -1.77
UPK3BL1B0FP48 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
UPK3BL1B0FP48 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
UPK3BL1B0FP48 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 RNU6-858P-201ENST00000362436 107 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 SNORD56.1-201ENST00000362913 68 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 Y_RNA.200-201ENST00000364018 102 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 RNU6-879P-201ENST00000364328 108 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 Y_RNA.297-201ENST00000364950 91 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 RNU6-290P-201ENST00000365212 101 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 SNORA5A-201ENST00000384111 134 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 AL033519.2-201ENST00000403958 392 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 Y_RNA.602-201ENST00000410535 92 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 AC096638.1-201ENST00000444678 216 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 SSXP4-201ENST00000451349 245 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 AC091874.1-201ENST00000511402 339 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 RN7SKP49-201ENST00000516675 260 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 RNA5SP179-201ENST00000517284 121 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 AL391261.3-201ENST00000557194 520 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 MIR3200-201ENST00000580767 85 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 AL451007.1-201ENST00000595491 289 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 AC091167.4-201ENST00000605079 184 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 AC004792.1-201ENST00000614523 137 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 SNORA43.4-201ENST00000629559 138 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 HAUS6P2-201ENST00000433254 2404 ntBASIC3.99□□□□□ -1.77
UPK3BL1B0FP48 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 RNU6-1141P-201ENST00000364520 107 ntBASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 RNU6-541P-201ENST00000384709 110 ntBASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 MIR634-201ENST00000385208 97 ntBASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 FTH1P15-201ENST00000406984 280 ntBASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 RNU2-20P-201ENST00000410425 191 ntBASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 RNU5A-5P-201ENST00000411054 116 ntBASIC3.98□□□□□ -1.77
UPK3BL1B0FP48 AC078809.1-201ENST00000427601 140 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms