Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 CBX3P9-201ENST00000402326 552 ntBASIC3.6□□□□□ -1.83
U3KQE9 YPEL5P1-201ENST00000419731 367 ntBASIC3.6□□□□□ -1.83
U3KQE9 AL365496.1-201ENST00000426885 215 ntBASIC3.6□□□□□ -1.83
U3KQE9 AC068287.1-201ENST00000430283 295 ntBASIC3.6□□□□□ -1.83
U3KQE9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.6□□□□□ -1.83
U3KQE9 AL135790.2-201ENST00000437701 267 ntBASIC3.6□□□□□ -1.83
U3KQE9 Z75741.1-201ENST00000446793 314 ntBASIC3.6□□□□□ -1.83
U3KQE9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
U3KQE9 RPL23AP70-201ENST00000483361 460 ntBASIC3.6□□□□□ -1.83
U3KQE9 RN7SL214P-201ENST00000487317 265 ntBASIC3.6□□□□□ -1.83
U3KQE9 AC108022.1-201ENST00000493466 478 ntBASIC3.6□□□□□ -1.83
U3KQE9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.6□□□□□ -1.83
U3KQE9 SNORA70.12-201ENST00000516084 153 ntBASIC3.6□□□□□ -1.83
U3KQE9 RNU6-107P-201ENST00000516643 102 ntBASIC3.6□□□□□ -1.83
U3KQE9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.6□□□□□ -1.83
U3KQE9 AC015912.2-201ENST00000571053 181 ntBASIC3.6□□□□□ -1.83
U3KQE9 RN7SL753P-201ENST00000581238 290 ntBASIC3.6□□□□□ -1.83
U3KQE9 AC209154.1-201ENST00000582156 337 ntBASIC3.6□□□□□ -1.83
U3KQE9 U7.2-201ENST00000607576 63 ntBASIC3.6□□□□□ -1.83
U3KQE9 TCL6_2.1-201ENST00000615162 119 ntBASIC3.6□□□□□ -1.83
U3KQE9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
U3KQE9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.6□□□□□ -1.83
U3KQE9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
U3KQE9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.6□□□□□ -1.83
U3KQE9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.6□□□□□ -1.83
U3KQE9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
U3KQE9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
U3KQE9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
U3KQE9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
U3KQE9 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.59□□□□□ -1.83
U3KQE9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
U3KQE9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
U3KQE9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
U3KQE9 AC139713.2-215ENST00000641428 5037 ntBASIC3.59□□□□□ -1.83
U3KQE9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.59□□□□□ -1.83
U3KQE9 SNORA74A-201ENST00000364089 198 ntBASIC3.59□□□□□ -1.83
U3KQE9 RN7SKP280-201ENST00000364196 304 ntBASIC3.59□□□□□ -1.83
U3KQE9 AP002088.1-201ENST00000382740 395 ntBASIC3.59□□□□□ -1.83
U3KQE9 RNU1-82P-201ENST00000390851 165 ntBASIC3.59□□□□□ -1.83
U3KQE9 U3.22-201ENST00000391120 215 ntBASIC3.59□□□□□ -1.83
U3KQE9 RNA5SP201-201ENST00000410316 124 ntBASIC3.59□□□□□ -1.83
U3KQE9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.59□□□□□ -1.83
U3KQE9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.59□□□□□ -1.83
U3KQE9 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.59□□□□□ -1.83
U3KQE9 AL049745.1-201ENST00000433953 286 ntBASIC3.59□□□□□ -1.83
U3KQE9 VDAC1P3-201ENST00000434069 851 ntBASIC3.59□□□□□ -1.83
U3KQE9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.59□□□□□ -1.83
U3KQE9 snoU13.14-201ENST00000459372 104 ntBASIC3.59□□□□□ -1.83
U3KQE9 AC146507.2-201ENST00000460608 476 ntBASIC3.59□□□□□ -1.83
U3KQE9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.59□□□□□ -1.83
U3KQE9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.59□□□□□ -1.83
U3KQE9 RNA5SP360-201ENST00000516555 118 ntBASIC3.59□□□□□ -1.83
U3KQE9 RNU6-1234P-201ENST00000516877 103 ntBASIC3.59□□□□□ -1.83
U3KQE9 SNORD19.2-201ENST00000516978 73 ntBASIC3.59□□□□□ -1.83
U3KQE9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.59□□□□□ -1.83
U3KQE9 AC090877.1-201ENST00000561418 344 ntBASIC3.59□□□□□ -1.83
U3KQE9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.59□□□□□ -1.83
U3KQE9 AL391813.1-201ENST00000603098 260 ntBASIC3.59□□□□□ -1.83
U3KQE9 AL391358.1-201ENST00000605342 190 ntBASIC3.59□□□□□ -1.83
U3KQE9 AC011603.4-201ENST00000611325 277 ntBASIC3.59□□□□□ -1.83
U3KQE9 AC005562.2-201ENST00000618264 111 ntBASIC3.59□□□□□ -1.83
U3KQE9 AC068870.2-201ENST00000620635 389 ntBASIC3.59□□□□□ -1.83
U3KQE9 BMS1P21-201ENST00000634565 365 ntBASIC3.59□□□□□ -1.83
U3KQE9 MIR3199-2-201ENST00000636243 86 ntBASIC3.59□□□□□ -1.83
U3KQE9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.59□□□□□ -1.83
U3KQE9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
U3KQE9 AC125257.1-201ENST00000560400 2930 ntBASIC3.59□□□□□ -1.84
U3KQE9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.59□□□□□ -1.84
U3KQE9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
U3KQE9 AC004944.1-201ENST00000517807 3059 ntBASIC3.59□□□□□ -1.84
U3KQE9 AC015813.6-201ENST00000624409 5808 ntBASIC3.58□□□□□ -1.84
U3KQE9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
U3KQE9 CUL1P1-201ENST00000509510 2425 ntBASIC3.58□□□□□ -1.84
U3KQE9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.58□□□□□ -1.84
U3KQE9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
U3KQE9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
U3KQE9 SNORA31-201ENST00000362607 130 ntBASIC3.58□□□□□ -1.84
U3KQE9 RNU6-1205P-201ENST00000363625 106 ntBASIC3.58□□□□□ -1.84
U3KQE9 RNY3P5-201ENST00000384127 102 ntBASIC3.58□□□□□ -1.84
U3KQE9 RNU6-748P-201ENST00000384648 107 ntBASIC3.58□□□□□ -1.84
U3KQE9 SPTLC1P2-201ENST00000407089 121 ntBASIC3.58□□□□□ -1.84
U3KQE9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.58□□□□□ -1.84
U3KQE9 AC006461.1-201ENST00000412637 326 ntBASIC3.58□□□□□ -1.84
U3KQE9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.58□□□□□ -1.84
U3KQE9 Z74021.1-201ENST00000423610 407 ntBASIC3.58□□□□□ -1.84
U3KQE9 PSMD10P3-201ENST00000437000 448 ntBASIC3.58□□□□□ -1.84
U3KQE9 snoU13.20-201ENST00000459180 104 ntBASIC3.58□□□□□ -1.84
U3KQE9 RN7SL177P-201ENST00000476596 299 ntBASIC3.58□□□□□ -1.84
U3KQE9 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.58□□□□□ -1.84
U3KQE9 RNU5F-2P-201ENST00000516066 82 ntBASIC3.58□□□□□ -1.84
U3KQE9 RNU6-1007P-201ENST00000516586 107 ntBASIC3.58□□□□□ -1.84
U3KQE9 EIF4A1P12-201ENST00000551910 141 ntBASIC3.58□□□□□ -1.84
U3KQE9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.58□□□□□ -1.84
U3KQE9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
U3KQE9 LINC00901.1-201ENST00000617252 152 ntBASIC3.58□□□□□ -1.84
U3KQE9 AC140113.4-201ENST00000622087 222 ntBASIC3.58□□□□□ -1.84
U3KQE9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.58□□□□□ -1.84
U3KQE9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
U3KQE9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
U3KQE9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms