Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 AC118273.1-201ENST00000525324 3006 ntBASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
HCFC2Q9Y5Z7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 Y_RNA.123-201ENST00000363338 102 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 Y_RNA.143-201ENST00000363520 106 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 Y_RNA.269-201ENST00000364685 89 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 Y_RNA.277-201ENST00000364754 102 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 Y_RNA.541-201ENST00000384640 113 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 BTF3L4P2-201ENST00000392798 346 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 AC017083.1-201ENST00000428093 483 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 RPL21P40-201ENST00000428586 483 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 AC124916.1-201ENST00000444020 547 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 snoU13.30-201ENST00000458951 104 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 AC010285.1-201ENST00000470580 392 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 AC025518.1-201ENST00000479856 347 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 RNU6-496P-201ENST00000516145 99 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 RNU6-572P-201ENST00000516724 80 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 SNORA31.18-201ENST00000517043 134 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 RN7SKP289-201ENST00000517244 295 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 CBX3P4-201ENST00000538909 354 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 TRAV28-201ENST00000557548 323 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 SNRPGP15-201ENST00000600149 222 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 AC004825.2-201ENST00000616634 455 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 MIR8057-201ENST00000620957 69 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 AC090617.7-201ENST00000623952 126 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 AC127459.3-201ENST00000624328 466 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 SCARNA4-201ENST00000629045 128 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 UBE3AP2-201ENST00000429033 2259 ntBASIC3.82□□□□□ -1.8
HCFC2Q9Y5Z7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 HSPA8P1-201ENST00000425843 1833 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 RNU4-35P-201ENST00000362588 141 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 RNU6-1301P-201ENST00000362724 104 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 Y_RNA.54-201ENST00000362766 105 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 RNU6-78P-201ENST00000362897 107 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 Y_RNA.83-201ENST00000363005 113 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 SNORD115-32-201ENST00000364079 82 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 SNORA38.1-201ENST00000364172 131 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 RNU6-17P-201ENST00000384245 107 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 RNU6-72P-201ENST00000384285 79 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 RNU6-18P-201ENST00000384527 107 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 AL079342.1-201ENST00000401460 267 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 RNU2-68P-201ENST00000410878 191 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 AL358453.1-201ENST00000422522 250 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 AC007560.1-201ENST00000426912 237 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 Y_RNA.644-201ENST00000459006 113 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 RNU7-120P-201ENST00000459334 63 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 SERF1AP1-201ENST00000514575 187 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 Y_RNA.674-201ENST00000516362 113 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 YPEL5P2-201ENST00000605553 359 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 AC011266.1-201ENST00000624119 3569 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 AC068254.2-201ENST00000623938 3577 ntBASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HCFC2Q9Y5Z7 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 Y_RNA.16-201ENST00000362421 102 ntBASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 RNU6-105P-201ENST00000363909 104 ntBASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 AC006026.2-201ENST00000457376 180 ntBASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 SNORD108-201ENST00000459332 71 ntBASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 RNU7-87P-201ENST00000459343 62 ntBASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 COX6CP14-201ENST00000469580 174 ntBASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 AC139453.3-201ENST00000493276 369 ntBASIC3.8□□□□□ -1.8
HCFC2Q9Y5Z7 SNORA31.8-201ENST00000516327 108 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms