Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 MIR450B-201ENST00000401182 78 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 AL356057.3-201ENST00000402607 340 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 FO393413.1-201ENST00000402892 195 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 SNORD88.1-201ENST00000408684 91 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 RNU2-68P-201ENST00000410878 191 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 RNA5SP184-201ENST00000411071 108 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 VN1R36P-201ENST00000414936 291 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 SKA2P1-201ENST00000425592 390 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 AC063976.3-201ENST00000426849 329 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 AL365400.1-201ENST00000431854 640 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 AL714022.1-201ENST00000439897 151 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 BRK1P2-201ENST00000442875 223 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 RPL32P28-201ENST00000443577 397 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 NDUFB1P2-201ENST00000449477 176 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 PPP1R2P5-201ENST00000457256 603 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 RPS27P26-201ENST00000494583 239 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 SNORA19.2-201ENST00000516013 114 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 RNU6-256P-201ENST00000516747 97 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 RNU6-826P-201ENST00000516827 104 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 AC005498.1-201ENST00000592125 465 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 AL022345.1-201ENST00000607292 135 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 uc_338.5-201ENST00000611839 155 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 AL138726.1-201ENST00000614873 333 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 RNU6-859P-201ENST00000362728 107 ntBASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 Y_RNA.480-201ENST00000384364 102 ntBASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 RNU6-166P-201ENST00000384371 107 ntBASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 MIR767-201ENST00000390228 109 ntBASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 NUP35P1-201ENST00000422734 947 ntBASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 RPL7P37-201ENST00000425095 738 ntBASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 HSPE1P20-201ENST00000538133 289 ntBASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 AP000763.2-201ENST00000540641 163 ntBASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 AC023043.2-201ENST00000589678 1026 ntBASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 AP000787.2-201ENST00000604432 568 ntBASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 MIR6852-201ENST00000621699 66 ntBASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SNX9Q9Y5X1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 AC138393.1-203ENST00000327086 343 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 MIR412-201ENST00000362142 91 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 RNU6-694P-201ENST00000364071 147 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 SNORD14B-201ENST00000364533 90 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 Y_RNA.324-201ENST00000365165 102 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 Z98749.2-208ENST00000381646 500 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 MIR548K-201ENST00000408406 116 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 ARL5AP4-201ENST00000430731 512 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 RPS3AP52-201ENST00000435639 297 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 AL109933.2-201ENST00000452651 260 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 RPS27AP9-201ENST00000477681 438 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 TRBVA-201ENST00000498804 316 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 RNU6-566P-201ENST00000516790 107 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 AP000889.1-201ENST00000530968 660 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 AC093027.1-201ENST00000546698 429 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 APOOP1-201ENST00000604695 592 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 uc_338.15-201ENST00000615470 191 ntBASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SNX9Q9Y5X1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 Y_RNA.813-201ENST00000364639 102 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 RNU6-1180P-201ENST00000364935 107 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 SNORD116-11-201ENST00000383882 92 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 RNU1-109P-201ENST00000383960 147 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 MIR34A-201ENST00000385130 110 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 AL590004.2-201ENST00000404787 371 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 RNU2-25P-201ENST00000411041 191 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 Y_RNA.623-201ENST00000411128 95 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 AL583843.1-201ENST00000456070 346 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 AC008571.1-201ENST00000467232 300 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 SEM1P1-201ENST00000506694 209 ntBASIC2.86□□□□□ -1.95
SNX9Q9Y5X1 MIR892C-201ENST00000516410 77 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms