Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SNORD56.3-201ENST00000363507 71 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 Y_RNA.158-201ENST00000363651 101 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 Y_RNA.314-201ENST00000365114 102 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AL138885.1-201ENST00000405921 675 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 RNA5SP44-201ENST00000410446 133 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AC009969.1-201ENST00000438726 172 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AC099799.1-201ENST00000439809 192 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AC124916.1-201ENST00000444020 547 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 CHEK2P4-201ENST00000450340 246 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 RPL23AP62-201ENST00000463396 453 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 RN7SL542P-201ENST00000467147 294 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 RN7SKP18-201ENST00000516005 275 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 RNU6-1046P-201ENST00000516538 107 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 RNU4-77P-201ENST00000516692 156 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AP006245.1-201ENST00000522549 120 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 MIR4474-201ENST00000579189 78 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AC091152.3-201ENST00000604227 325 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AC019159.1-201ENST00000605094 187 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 SNORD58B-201ENST00000607313 66 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 MIR1244-1-201ENST00000612829 85 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AC024581.2-201ENST00000619986 252 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AC022149.2-201ENST00000621061 203 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 MIR1244-3-201ENST00000635744 85 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 MIR1244-2-201ENST00000636449 85 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 MIR1244-4-202ENST00000636813 85 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AC009541.1-201ENST00000438279 2662 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AC007496.3-201ENST00000624987 3443 ntBASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
R3HCC1Q9Y3T6 AC068647.1-201ENST00000489539 2265 ntBASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 RNY3P11-201ENST00000364153 102 ntBASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 SNORD32A-201ENST00000364805 84 ntBASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 RNU6-843P-201ENST00000384454 104 ntBASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 Y_RNA.645-201ENST00000391229 102 ntBASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 AC093578.1-201ENST00000415219 368 ntBASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 AC097462.2-201ENST00000504623 481 ntBASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 RNA5SP380-201ENST00000517190 98 ntBASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 AC007991.1-201ENST00000522680 631 ntBASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 MRPS36P4-201ENST00000534436 298 ntBASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 AC060766.3-201ENST00000591442 263 ntBASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.98□□□□□ -1.77
R3HCC1Q9Y3T6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 AC032011.1-201ENST00000611703 1549 ntBASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 MIR544A-201ENST00000384855 91 ntBASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 RNA5SP494-201ENST00000410653 129 ntBASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 RNU6-1245P-201ENST00000411130 106 ntBASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 AL365496.1-201ENST00000426885 215 ntBASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 AC096644.2-201ENST00000429278 159 ntBASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 AL133547.1-201ENST00000448546 220 ntBASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 SNORA31.21-201ENST00000517180 77 ntBASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 AC010653.1-201ENST00000571108 881 ntBASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 AC136443.5-201ENST00000603741 370 ntBASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 RBBP8P1-201ENST00000449447 1844 ntBASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
R3HCC1Q9Y3T6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 AC091812.1-201ENST00000432235 1948 ntBASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 RNA5SP383-201ENST00000362934 120 ntBASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 AC117470.1-201ENST00000381974 330 ntBASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 Y_RNA.527-201ENST00000384573 102 ntBASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 RNU2-23P-201ENST00000410545 195 ntBASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 AL353752.1-201ENST00000454946 260 ntBASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 AC004584.2-201ENST00000570407 410 ntBASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 AC107294.3-201ENST00000609211 526 ntBASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 AL121772.2-201ENST00000614331 297 ntBASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 MIR3529-201ENST00000637713 78 ntBASIC3.96□□□□□ -1.78
R3HCC1Q9Y3T6 AC004944.1-201ENST00000517807 3059 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms