Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 SNORD2.1-201ENST00000458762 69 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.68□□□□□ -1.66
NOD1Q9Y239 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.68□□□□□ -1.66
NOD1Q9Y239 RNU6-513P-201ENST00000516104 104 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 RNY3P16-201ENST00000516338 101 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NOD1Q9Y239 MIR3690-201ENST00000580266 75 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.68□□□□□ -1.66
NOD1Q9Y239 AC048347.1-201ENST00000624621 427 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NOD1Q9Y239 ADAM3A-203ENST00000461344 2157 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 AC000123.3-201ENST00000624029 4975 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 SCN1A-220ENST00000641603 12506 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NOD1Q9Y239 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.68□□□□□ -1.66
NOD1Q9Y239 AC087190.4-201ENST00000574616 8334 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.67□□□□□ -1.66
NOD1Q9Y239 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NOD1Q9Y239 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NOD1Q9Y239 Y_RNA.291-201ENST00000364886 113 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 SNORA72.2-201ENST00000365028 127 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 Y_RNA.308-201ENST00000365043 101 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 RNY1P5-201ENST00000383890 115 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 MIR200C-201ENST00000384980 68 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 RPL21P17-201ENST00000397467 475 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 SNORA74C-2-201ENST00000411179 201 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 YPEL5P1-201ENST00000419731 367 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 AC012306.1-201ENST00000423267 114 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 AC112220.1-201ENST00000434628 355 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 AC009237.7-201ENST00000447357 229 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 UQCRBP2-201ENST00000447827 297 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 AC005042.3-201ENST00000453230 174 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 RPL30P12-201ENST00000474666 353 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 IGKV2-38-201ENST00000517443 247 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.67□□□□□ -1.66
NOD1Q9Y239 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.67□□□□□ -1.66
NOD1Q9Y239 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NOD1Q9Y239 AC022441.3-201ENST00000605737 136 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 AC005828.6-201ENST00000606610 232 ntBASIC4.67□□□□□ -1.66
NOD1Q9Y239 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.67□□□□□ -1.66
NOD1Q9Y239 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.67□□□□□ -1.66
NOD1Q9Y239 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.67□□□□□ -1.66
NOD1Q9Y239 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.67□□□□□ -1.66
NOD1Q9Y239 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NOD1Q9Y239 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.67□□□□□ -1.66
NOD1Q9Y239 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
NOD1Q9Y239 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NOD1Q9Y239 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NOD1Q9Y239 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.66□□□□□ -1.66
NOD1Q9Y239 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.66□□□□□ -1.66
NOD1Q9Y239 AL359854.1-201ENST00000614203 1594 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NOD1Q9Y239 RNU5F-3P-201ENST00000363767 117 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NOD1Q9Y239 CRYBB2P1-203ENST00000415709 538 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.66□□□□□ -1.66
NOD1Q9Y239 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.66□□□□□ -1.66
NOD1Q9Y239 AC084357.1-201ENST00000473404 255 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.66□□□□□ -1.66
NOD1Q9Y239 RNU5F-8P-201ENST00000515941 111 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 RNU6-346P-201ENST00000516288 111 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 RNU2-58P-201ENST00000516403 183 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 RNA5SP143-201ENST00000516936 115 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 IFITM8P-201ENST00000522529 394 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 MRPS18CP4-201ENST00000535821 231 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 AC021739.1-201ENST00000559631 174 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 AC233702.2-202ENST00000562547 291 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 AC055872.1-201ENST00000570978 278 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 MTND6P33-201ENST00000571794 183 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 RN7SL703P-201ENST00000578485 302 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 AC004825.2-201ENST00000616634 455 ntBASIC4.66□□□□□ -1.66
NOD1Q9Y239 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
NOD1Q9Y239 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.66□□□□□ -1.66
NOD1Q9Y239 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.66□□□□□ -1.66
NOD1Q9Y239 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NOD1Q9Y239 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.66□□□□□ -1.66
NOD1Q9Y239 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
NOD1Q9Y239 AL109809.4-201ENST00000603520 2185 ntBASIC4.65□□□□□ -1.66
NOD1Q9Y239 ZNF204P-201ENST00000416749 2397 ntBASIC4.65□□□□□ -1.66
NOD1Q9Y239 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NOD1Q9Y239 BX322639.1-202ENST00000423987 2213 ntBASIC4.65□□□□□ -1.66
NOD1Q9Y239 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
NOD1Q9Y239 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.65□□□□□ -1.66
NOD1Q9Y239 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NOD1Q9Y239 Y_RNA.8-201ENST00000362353 102 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 SNORD113-1-201ENST00000365321 69 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 RNU6-804P-201ENST00000384286 107 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 RNU1-44P-201ENST00000384453 163 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 MIR613-201ENST00000385248 95 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 SNORA26.3-201ENST00000391119 136 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 RNA5SP239-201ENST00000410218 129 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 Y_RNA.597-201ENST00000410463 100 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 RPS26P42-201ENST00000413485 326 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 AC099548.1-201ENST00000421443 426 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 RNU6-625P-201ENST00000459412 107 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 RNA5SP446-201ENST00000515955 82 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 RNU7-200P-201ENST00000516105 62 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NOD1Q9Y239 AC011602.1-201ENST00000546484 331 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms