Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 SNORA14A-201ENST00000364773 135 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 SNORD116-11-201ENST00000383882 92 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 Y_RNA.480-201ENST00000384364 102 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 RNU6-45P-201ENST00000384471 107 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 MIR606-201ENST00000384851 96 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 SAR1AP2-201ENST00000392696 594 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 MIR450B-201ENST00000401182 78 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 MTCYBP4-201ENST00000401524 249 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 AL139039.1-201ENST00000401900 692 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 AL139396.1-201ENST00000421137 167 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 SKA2P1-201ENST00000425592 390 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 AL669831.1-202ENST00000428504 417 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 MTND1P17-201ENST00000448961 204 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 RNU7-167P-201ENST00000459160 62 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 snoU13.28-201ENST00000459235 104 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 Y_RNA.631-201ENST00000459607 101 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 AC128713.1-201ENST00000471495 306 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 RPS27P27-201ENST00000498779 255 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 RNU2-69P-201ENST00000516061 100 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 AC009902.1-201ENST00000519351 183 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 AP000867.2-201ENST00000532468 320 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 IMMP1LP2-201ENST00000552954 492 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 AC027176.1-201ENST00000560204 514 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 AC007151.1-201ENST00000572774 483 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 AP001836.1-201ENST00000604675 523 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 AL138726.1-201ENST00000614873 333 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 FAM157A-202ENST00000615155 405 ntBASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SCAF8Q9UPN6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.4□□□□□ -1.86
SCAF8Q9UPN6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.4□□□□□ -1.86
SCAF8Q9UPN6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 Y_RNA.135-201ENST00000363439 95 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 RNU6-884P-201ENST00000363889 107 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 RNU6-198P-201ENST00000384258 104 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 SNORA40C-201ENST00000391285 128 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 BMS1P22-201ENST00000414726 313 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 RPLP0P7-201ENST00000416050 667 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 AL353621.1-201ENST00000418219 243 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 Z82205.1-201ENST00000428456 297 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 RPL26P9-201ENST00000457466 433 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 HMGN1P18-201ENST00000457642 277 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 AC025755.1-201ENST00000521306 278 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 MIR4506-201ENST00000584693 77 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 MIR5692C1-201ENST00000585309 91 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 AC007938.3-201ENST00000604965 623 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 AC040896.1-201ENST00000613819 479 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 AC022418.1-201ENST00000624118 445 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 AC093010.3-201ENST00000570269 15214 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 ZNF519P1-201ENST00000449011 1626 ntBASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SCAF8Q9UPN6 FAM35CP-201ENST00000554755 2470 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 Y_RNA.202-201ENST00000364083 110 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 SNORA63C-201ENST00000364578 129 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 Y_RNA.395-201ENST00000383945 109 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 Y_RNA.445-201ENST00000384168 102 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 RNU6-738P-201ENST00000384531 106 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 RNU1-101P-201ENST00000391171 127 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 RNU6-55P-201ENST00000411092 107 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 RNU6-954P-201ENST00000411355 107 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 RPL21P90-201ENST00000415692 466 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 AL513124.1-201ENST00000450410 614 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 AC130509.1-201ENST00000464158 433 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 AC090096.1-201ENST00000489168 390 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 AC022493.1-201ENST00000492984 337 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 AC008526.1-201ENST00000509149 338 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 AC093303.1-201ENST00000514549 295 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 SNORA14.1-201ENST00000516113 141 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 RNU6-1069P-201ENST00000516612 133 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 RN7SKP282-201ENST00000516824 299 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 Y_RNA.711-201ENST00000516993 102 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 AL391261.3-201ENST00000557194 520 ntBASIC3.39□□□□□ -1.87
SCAF8Q9UPN6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms