Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC010653.1-201ENST00000571108 881 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 MIR4790-201ENST00000577799 79 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX4Q9UIU6 POLR3GP2-201ENST00000588366 668 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 HSPE1P7-201ENST00000604681 321 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX4Q9UIU6 U2.21-201ENST00000637295 81 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AC108206.1-201ENST00000570186 4159 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SIX4Q9UIU6 ZNF519P1-201ENST00000449011 1626 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.81□□□□□ -1.96
SIX4Q9UIU6 Z82195.2-201ENST00000612348 18351 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SIX4Q9UIU6 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 Y_RNA.11-201ENST00000362375 109 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 RNU4-79P-201ENST00000362764 141 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 RNU6-884P-201ENST00000363889 107 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 SNORD116-11-201ENST00000383882 92 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 RNU6-1035P-201ENST00000384477 107 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 MIR10A-201ENST00000385043 110 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 SNORD73A-201ENST00000386062 65 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 RNU4-14P-201ENST00000410858 122 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 PGBD4P6-201ENST00000421501 610 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.81□□□□□ -1.96
SIX4Q9UIU6 SKA2P1-201ENST00000425592 390 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 MTND4P28-201ENST00000426217 387 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 AC011816.1-201ENST00000441346 546 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 BRK1P2-201ENST00000442875 223 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 AL078601.1-201ENST00000444542 271 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 MTND1P17-201ENST00000448961 204 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 RPS3P1-201ENST00000456781 192 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 AC092798.1-201ENST00000458542 409 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 RNU7-138P-201ENST00000459479 64 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 RN7SL297P-201ENST00000483161 293 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 MTCO1P29-201ENST00000496868 288 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 MTND5P5-201ENST00000503764 376 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 AC096725.1-201ENST00000514266 313 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 RNA5SP385-201ENST00000515947 110 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 RNA5SP76-201ENST00000516277 87 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 RPL12P50-201ENST00000603116 116 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 RNU6-85P-201ENST00000605989 107 ntBASIC2.81□□□□□ -1.96
SIX4Q9UIU6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SIX4Q9UIU6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SIX4Q9UIU6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SIX4Q9UIU6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.81□□□□□ -1.96
SIX4Q9UIU6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AC233263.6-201ENST00000631132 1963 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 RNU6-778P-201ENST00000363269 103 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 CD24P4-201ENST00000382840 243 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 SNORD88.1-201ENST00000408684 91 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AC099548.1-201ENST00000421443 426 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 RPS3AP52-201ENST00000435639 297 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AL359672.1-201ENST00000442302 409 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 NDUFB1P2-201ENST00000449477 176 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AC069113.1-201ENST00000517763 267 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AC087854.1-201ENST00000519706 414 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AC113139.1-201ENST00000605049 239 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AL359757.2-201ENST00000624309 274 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 U6.99-201ENST00000637524 83 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AC022336.2-201ENST00000568966 2538 ntBASIC2.8□□□□□ -1.96
SIX4Q9UIU6 AC009487.2-201ENST00000420969 6821 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 RNU6-562P-201ENST00000362731 107 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 RNA5SP139-201ENST00000364340 117 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 Z98749.2-208ENST00000381646 500 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SIX4Q9UIU6 RNU6-128P-201ENST00000383976 107 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 RNU6-658P-201ENST00000384606 106 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 RN7SKP158-201ENST00000410453 326 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 AL353729.1-201ENST00000425044 720 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.79□□□□□ -1.96
SIX4Q9UIU6 AL627311.1-201ENST00000431514 115 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 Y_RNA.632-201ENST00000459189 102 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 RPS29P20-201ENST00000489592 171 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.79□□□□□ -1.96
SIX4Q9UIU6 RNU6-703P-201ENST00000516946 107 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 RNU6-1183P-201ENST00000517054 60 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 AC104576.1-201ENST00000524225 88 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.79□□□□□ -1.96
SIX4Q9UIU6 ELOCP5-201ENST00000604924 333 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 MTND4LP5-201ENST00000605152 292 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 AC016727.1-205ENST00000605437 569 ntBASIC2.79□□□□□ -1.96
SIX4Q9UIU6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.79□□□□□ -1.96
SIX4Q9UIU6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SIX4Q9UIU6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 225.3 ms