Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 RPL22P17-201ENST00000438729 315 ntBASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 AL512286.1-201ENST00000439244 400 ntBASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 AL139824.2-201ENST00000458731 1095 ntBASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 AC116347.2-201ENST00000514912 523 ntBASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 RNU7-51P-201ENST00000516560 62 ntBASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 AC109329.1-201ENST00000518744 317 ntBASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 RNU6-87P-201ENST00000607561 108 ntBASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 AC104010.1-201ENST00000616889 150 ntBASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 AC006338.1-201ENST00000618453 749 ntBASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 AL445523.1-201ENST00000451184 1362 ntBASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.92□□□□□ -2.1
CTNNA3Q9UI47 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 MTND4P23-201ENST00000447723 1363 ntBASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 RNU11-3P-201ENST00000391111 133 ntBASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 BX510359.4-201ENST00000423750 193 ntBASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AL365184.2-201ENST00000431139 435 ntBASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AC093899.1-201ENST00000457984 376 ntBASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 ELOCP32-201ENST00000548625 324 ntBASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 BNIP3P30-201ENST00000601184 574 ntBASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 BX248123.2-201ENST00000606318 124 ntBASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AL031775.1-201ENST00000607014 887 ntBASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AC027449.1-201ENST00000608890 407 ntBASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 AC092192.1-201ENST00000633154 1018 ntBASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CTNNA3Q9UI47 RNU6-1010P-201ENST00000362757 107 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 RNY4P16-201ENST00000364768 94 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 RNU6-190P-201ENST00000384154 102 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 MIR186-201ENST00000384988 86 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 OR9R1P-201ENST00000412200 877 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 AC087884.1-201ENST00000469738 328 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 RNA5SP490-201ENST00000517141 136 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 MTND4LP18-201ENST00000526864 291 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 MIR15A-201ENST00000607334 83 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 AC098614.4-201ENST00000607601 462 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 AL355816.2-201ENST00000610049 647 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 AL050303.3-201ENST00000613704 284 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 uc_338.15-201ENST00000615470 191 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 AL359547.2-201ENST00000615810 418 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 AL359314.1-201ENST00000616913 261 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 AC009878.1-201ENST00000621819 340 ntBASIC1.9□□□□□ -2.11
CTNNA3Q9UI47 MIR412-201ENST00000362142 91 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 RNU4-42P-201ENST00000364738 142 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 SNORA72.3-201ENST00000365074 132 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 RNU6-533P-201ENST00000384144 107 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 AL033519.2-201ENST00000403958 392 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 RNU2-32P-201ENST00000411193 191 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 AC013410.2-201ENST00000422627 201 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 RNU7-95P-201ENST00000459222 64 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 MTND1P22-201ENST00000510572 951 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 RNA5SP337-201ENST00000517007 109 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 AP003392.2-201ENST00000527269 208 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 AP005435.4-201ENST00000529514 284 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 MIR4303-201ENST00000581299 66 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 AL138889.2-201ENST00000603883 242 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 AC068944.2-201ENST00000610373 403 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 AC130324.3-201ENST00000614165 542 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 AC099842.1-201ENST00000619919 596 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 U1.36-201ENST00000620684 176 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 AL391262.2-201ENST00000622466 494 ntBASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CTNNA3Q9UI47 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 AL391987.6-201ENST00000305671 199 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 RNU6-809P-201ENST00000384461 107 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 MIR489-201ENST00000384923 84 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 MIR1283-2-201ENST00000408621 87 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 UBE2V1P10-201ENST00000414685 269 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms