Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
DKK3Q9UBP4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
DKK3Q9UBP4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.35□□□□□ -1.87
DKK3Q9UBP4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.35□□□□□ -1.87
DKK3Q9UBP4 SNORD14B-201ENST00000364533 90 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 RNU6-842P-201ENST00000384269 107 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 Y_RNA.473-201ENST00000384333 102 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 SNORA26.7-201ENST00000391288 122 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 AC126124.2-201ENST00000413542 321 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.35□□□□□ -1.87
DKK3Q9UBP4 MCFD2P1-201ENST00000417812 300 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 TMEM167AP1-201ENST00000423409 219 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 RPL23AP82-202ENST00000427528 469 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 AC093151.1-201ENST00000427711 313 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 MTND3P2-201ENST00000438452 342 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 RPL23AP58-201ENST00000440453 469 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 PIGFP3-201ENST00000441918 722 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 CECR9-201ENST00000453421 199 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 PCMTD1P1-201ENST00000455560 355 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 MTND5P22-201ENST00000458380 195 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 AC146507.2-201ENST00000460608 476 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 AC021205.2-201ENST00000480069 347 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 PTP4A1P4-201ENST00000512479 322 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 RNA5SP384-201ENST00000516615 116 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 AC025755.1-201ENST00000521306 278 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 AC104576.1-201ENST00000524225 88 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.35□□□□□ -1.87
DKK3Q9UBP4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.35□□□□□ -1.87
DKK3Q9UBP4 Z69720.2-201ENST00000624755 279 ntBASIC3.35□□□□□ -1.87
DKK3Q9UBP4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
DKK3Q9UBP4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.35□□□□□ -1.87
DKK3Q9UBP4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
DKK3Q9UBP4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
DKK3Q9UBP4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.35□□□□□ -1.87
DKK3Q9UBP4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.34□□□□□ -1.87
DKK3Q9UBP4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
DKK3Q9UBP4 MAPK10-322ENST00000641485 4530 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.34□□□□□ -1.87
DKK3Q9UBP4 MTND5P16-201ENST00000460269 1703 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 Y_RNA.2-201ENST00000362330 96 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 Y_RNA.158-201ENST00000363651 101 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 Y_RNA.459-201ENST00000384251 102 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 MIR493-201ENST00000385254 89 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 UBA52P6-201ENST00000399822 382 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 RNA5SP344-201ENST00000411081 104 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.34□□□□□ -1.87
DKK3Q9UBP4 AL133396.1-201ENST00000432048 687 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 BX679664.1-201ENST00000434429 253 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.34□□□□□ -1.87
DKK3Q9UBP4 RNU6-1037P-201ENST00000459571 107 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.34□□□□□ -1.87
DKK3Q9UBP4 SNORA25.10-201ENST00000515926 124 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 SCARNA16.2-201ENST00000516520 172 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 RNA5SP165-201ENST00000517142 115 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 Y_RNA.720-201ENST00000517166 92 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
DKK3Q9UBP4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.34□□□□□ -1.87
DKK3Q9UBP4 CPDP1-201ENST00000579660 283 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 AC123912.5-201ENST00000605470 343 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 YPEL5P2-201ENST00000605553 359 ntBASIC3.34□□□□□ -1.87
DKK3Q9UBP4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.34□□□□□ -1.88
DKK3Q9UBP4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
DKK3Q9UBP4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.33□□□□□ -1.88
DKK3Q9UBP4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
DKK3Q9UBP4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
DKK3Q9UBP4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.33□□□□□ -1.88
DKK3Q9UBP4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.33□□□□□ -1.88
DKK3Q9UBP4 Y_RNA.133-201ENST00000363428 110 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 RNU1-115P-201ENST00000365329 160 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 AP002088.1-201ENST00000382740 395 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 RNU6-301P-201ENST00000384277 107 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 SNORA1.3-201ENST00000384676 136 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 RNU6-331P-201ENST00000384724 107 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 RNA5SP252-201ENST00000391131 119 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 RNU6-1197P-201ENST00000391183 107 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 RPL21P75-201ENST00000396599 483 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 RPL21P28-201ENST00000401418 483 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.33□□□□□ -1.88
DKK3Q9UBP4 RNU6-174P-201ENST00000410406 106 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 RNU2-68P-201ENST00000410878 191 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 SNORD56-201ENST00000413522 71 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.33□□□□□ -1.88
DKK3Q9UBP4 SNRPEP9-201ENST00000436794 238 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.33□□□□□ -1.88
DKK3Q9UBP4 AC011816.1-201ENST00000441346 546 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.33□□□□□ -1.88
DKK3Q9UBP4 AL583843.1-201ENST00000456070 346 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 RPL21P39-201ENST00000463605 483 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 AC008571.1-201ENST00000467232 300 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 AL135752.1-201ENST00000479477 471 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 AC087190.1-201ENST00000484462 480 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 AC093591.1-201ENST00000491435 481 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.33□□□□□ -1.88
DKK3Q9UBP4 RPL30P5-201ENST00000494923 336 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 RPL21P16-201ENST00000495531 483 ntBASIC3.33□□□□□ -1.88
DKK3Q9UBP4 AC113155.1-201ENST00000511141 769 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms