Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RNU6-263P-201ENST00000363811 107 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 SNORD12-201ENST00000391002 90 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 RPS29P15-201ENST00000458329 171 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 MRPS36P4-201ENST00000534436 298 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AC012669.1-201ENST00000603209 283 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 NANOGP2-201ENST00000435391 727 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 HSPE1P9-201ENST00000440046 311 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AC245102.2-201ENST00000448956 180 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 MED28P6-201ENST00000558776 231 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AC026271.5-201ENST00000577873 130 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AC040896.1-201ENST00000613819 479 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AC138627.2-201ENST00000624202 601 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AC009033.1-201ENST00000624279 431 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AC092447.10-201ENST00000620607 1652 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 SNORA42.1-201ENST00000363515 137 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 SNORD114-24-201ENST00000365029 72 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 RNU6-546P-201ENST00000383991 107 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 MIR140-201ENST00000385282 100 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 SNORD99-201ENST00000408612 74 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 AC021146.9-201ENST00000512503 156 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 AC091965.5-201ENST00000624785 342 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 RNA5SP391-201ENST00000363456 119 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 RNU6-119P-201ENST00000364882 107 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 AC016909.1-201ENST00000415916 166 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 AC007742.1-201ENST00000425789 329 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 ELOCP26-201ENST00000436067 329 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 RNU6-320P-201ENST00000516511 106 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 AL356157.2-201ENST00000605122 111 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 AC138749.5-201ENST00000611461 208 ntBASIC-0.25□□□□□ -2.45
CHD7Q9P2D1 AC099677.1-201ENST00000420575 175 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 SNORA31.4-201ENST00000516049 129 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 RNU2-12P-201ENST00000517216 168 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 AP001328.1-201ENST00000528550 176 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 AC109810.1-201ENST00000534066 224 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 AL031667.3-201ENST00000620124 655 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 AC139712.2-201ENST00000424302 339 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 AC087481.2-201ENST00000565492 330 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 AC105148.1-201ENST00000604961 409 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 AC104408.1-201ENST00000605241 170 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 AC008759.3-201ENST00000613300 508 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 MIR1295B-201ENST00000636144 60 ntBASIC-0.26□□□□□ -2.45
CHD7Q9P2D1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 MIR29C-201ENST00000385231 88 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 HMGN1P12-201ENST00000499125 195 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 MTND2P26-201ENST00000528255 1029 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 MIR644A-201ENST00000385262 94 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 RPS15AP38-201ENST00000413110 372 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 ELOCP11-201ENST00000436690 332 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 RPS15AP9-201ENST00000439856 381 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 ELOCP16-201ENST00000444494 332 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 RPS3AP17-201ENST00000472594 777 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 HAUS1P3-201ENST00000523909 662 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 MIR95-201ENST00000385072 81 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 AC063976.4-201ENST00000421971 163 ntBASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHD7Q9P2D1 MIR302D-201ENST00000362275 68 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 RNU4-23P-201ENST00000362839 140 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 C1DP1-201ENST00000426049 402 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 GTF2IP3-201ENST00000433887 494 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms