Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU6-750P-201ENST00000390946 107 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 ATG3P1-201ENST00000419507 911 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.29□□□□□ -1.88
COL20A1Q9P218 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.29□□□□□ -1.88
COL20A1Q9P218 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.29□□□□□ -1.88
COL20A1Q9P218 RPL23AP49-201ENST00000492925 468 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.29□□□□□ -1.88
COL20A1Q9P218 RNU6-277P-201ENST00000516272 106 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 IMMP1LP2-201ENST00000552954 492 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.29□□□□□ -1.88
COL20A1Q9P218 DNAJC8P1-201ENST00000554535 372 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 POLR3GP2-201ENST00000588366 668 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 AC020895.1-201ENST00000595362 272 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 VN1R107P-201ENST00000601784 209 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 AL121917.1-203ENST00000605534 577 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 AC011890.2-201ENST00000613393 294 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL20A1Q9P218 GABRG2-229ENST00000641017 3628 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
COL20A1Q9P218 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL20A1Q9P218 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL20A1Q9P218 SNORA9.2-201ENST00000365361 133 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
COL20A1Q9P218 AL030996.1-201ENST00000411430 235 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 AL590632.1-201ENST00000424289 371 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 MTND4P28-201ENST00000426217 387 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 PTGES3P4-201ENST00000426243 356 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 AL591043.1-201ENST00000432461 424 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 AC236972.2-201ENST00000434979 310 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 U8.21-201ENST00000459536 136 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 MRPL42P6-201ENST00000486397 371 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 MTCYBP40-201ENST00000509390 1135 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.28□□□□□ -1.88
COL20A1Q9P218 SMURF2P1-201ENST00000514992 481 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.28□□□□□ -1.88
COL20A1Q9P218 MIR4795-201ENST00000584182 89 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.28□□□□□ -1.88
COL20A1Q9P218 AC006023.1-201ENST00000603944 259 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 MIR6128-201ENST00000615528 109 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 MIR3529-201ENST00000637713 78 ntBASIC3.28□□□□□ -1.88
COL20A1Q9P218 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.28□□□□□ -1.88
COL20A1Q9P218 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL20A1Q9P218 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.28□□□□□ -1.89
COL20A1Q9P218 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.27□□□□□ -1.89
COL20A1Q9P218 MAPK10-322ENST00000641485 4530 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
COL20A1Q9P218 HAUS6P2-201ENST00000433254 2404 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 RNU6-805P-201ENST00000365643 106 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 Y_RNA.509-201ENST00000384506 99 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 RNU6-851P-201ENST00000384565 107 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 RNU6-19P-201ENST00000384718 107 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 FTH1P15-201ENST00000406984 280 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 RNA5SP274-201ENST00000410484 108 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 RNU2-49P-201ENST00000410666 184 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 RNU6-1245P-201ENST00000411130 106 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.27□□□□□ -1.89
COL20A1Q9P218 RPL23AP22-201ENST00000437556 453 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 PCMTD1P1-201ENST00000455560 355 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 RN7SL633P-201ENST00000488974 297 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC018437.1-201ENST00000492214 406 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC114801.2-201ENST00000503825 781 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC116337.1-201ENST00000509680 687 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 RPL23AP94-201ENST00000512518 302 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 ACA59.2-201ENST00000517061 156 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.27□□□□□ -1.89
COL20A1Q9P218 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC009163.5-201ENST00000575421 637 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC009314.1-201ENST00000603871 304 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC016727.1-205ENST00000605437 569 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC124303.1-201ENST00000605703 360 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 AC010889.1-201ENST00000566193 2666 ntBASIC3.27□□□□□ -1.89
COL20A1Q9P218 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL20A1Q9P218 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL20A1Q9P218 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL20A1Q9P218 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL20A1Q9P218 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
COL20A1Q9P218 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
COL20A1Q9P218 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL20A1Q9P218 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.26□□□□□ -1.89
COL20A1Q9P218 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.26□□□□□ -1.89
COL20A1Q9P218 RNU6-1297P-201ENST00000384415 104 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 SNORD116-20-201ENST00000384529 92 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 RNU6-601P-201ENST00000384540 107 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 RNA5SP293-201ENST00000410527 113 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 AC245054.2-201ENST00000415639 319 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.26□□□□□ -1.89
COL20A1Q9P218 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.26□□□□□ -1.89
COL20A1Q9P218 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.26□□□□□ -1.89
COL20A1Q9P218 UBE2V1P7-201ENST00000446395 340 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.26□□□□□ -1.89
COL20A1Q9P218 RPS27P29-201ENST00000463110 252 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 MTND4P17-201ENST00000470444 350 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 AC107626.1-201ENST00000471084 183 ntBASIC3.26□□□□□ -1.89
COL20A1Q9P218 MED28P2-201ENST00000475771 317 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms