Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 MIR6715A-201ENST00000615929 79 ntBASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 AC018926.1-201ENST00000616335 435 ntBASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 AC007742.2-201ENST00000618226 398 ntBASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 AP003400.6-201ENST00000624698 740 ntBASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 RNU6-514P-201ENST00000384208 107 ntBASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 RPL21P1-201ENST00000399532 476 ntBASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 FO393419.3-201ENST00000428741 282 ntBASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 MOB1AP2-201ENST00000446060 614 ntBASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 AL031313.1-201ENST00000448435 256 ntBASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 AKIRIN2P1-201ENST00000505898 352 ntBASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 AC093249.1-201ENST00000567049 203 ntBASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 AC025627.3-201ENST00000582078 182 ntBASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 AC239868.4-201ENST00000608318 671 ntBASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 AC090517.2-201ENST00000614966 680 ntBASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 AC022709.1-201ENST00000615967 87 ntBASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.43□□□□□ -2.48
SMCO4Q9NRQ5 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.44□□□□□ -2.48
SMCO4Q9NRQ5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.44□□□□□ -2.48
SMCO4Q9NRQ5 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.44□□□□□ -2.48
SMCO4Q9NRQ5 MTND1P22-201ENST00000510572 951 ntBASIC-0.44□□□□□ -2.48
SMCO4Q9NRQ5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.44□□□□□ -2.48
SMCO4Q9NRQ5 LRRC34P2-201ENST00000514850 553 ntBASIC-0.44□□□□□ -2.48
SMCO4Q9NRQ5 AC012065.4-201ENST00000602445 679 ntBASIC-0.44□□□□□ -2.48
SMCO4Q9NRQ5 BNIP3P31-201ENST00000604515 566 ntBASIC-0.44□□□□□ -2.48
SMCO4Q9NRQ5 AC104820.1-201ENST00000624183 307 ntBASIC-0.44□□□□□ -2.48
SMCO4Q9NRQ5 AC010487.4-201ENST00000637027 61 ntBASIC-0.44□□□□□ -2.48
SMCO4Q9NRQ5 AC100810.6-201ENST00000638068 285 ntBASIC-0.44□□□□□ -2.48
SMCO4Q9NRQ5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.44□□□□□ -2.48
SMCO4Q9NRQ5 SNORA25.9-201ENST00000365087 128 ntBASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 RNU6V-201ENST00000384105 107 ntBASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 RNU6-331P-201ENST00000384724 107 ntBASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 RPS27AP8-201ENST00000452665 445 ntBASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 AL590229.1-201ENST00000603497 542 ntBASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 AL357094.1-201ENST00000603845 844 ntBASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 AC004805.2-201ENST00000605382 482 ntBASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
SMCO4Q9NRQ5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 RNA5SP214-201ENST00000363378 118 ntBASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 RNU6-163P-201ENST00000384396 106 ntBASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 SNORA16.2-201ENST00000390991 127 ntBASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 RPL37P21-201ENST00000435890 276 ntBASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 BRK1P2-201ENST00000442875 223 ntBASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 SNRPGP12-201ENST00000449481 213 ntBASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 snoU13.25-201ENST00000458945 104 ntBASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 AC141557.1-201ENST00000540982 400 ntBASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 MIR4781-201ENST00000585250 76 ntBASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 AC104984.5-201ENST00000586878 94 ntBASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 MIR8070-201ENST00000616510 88 ntBASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 AC079416.3-201ENST00000624479 549 ntBASIC-0.46□□□□□ -2.48
SMCO4Q9NRQ5 RNU6-743P-201ENST00000364151 106 ntBASIC-0.47□□□□□ -2.48
SMCO4Q9NRQ5 RNU6-302P-201ENST00000365249 107 ntBASIC-0.47□□□□□ -2.48
SMCO4Q9NRQ5 RNA5SP259-201ENST00000365541 109 ntBASIC-0.47□□□□□ -2.48
SMCO4Q9NRQ5 RNU4-48P-201ENST00000365559 182 ntBASIC-0.47□□□□□ -2.48
SMCO4Q9NRQ5 AC008267.5-201ENST00000424928 265 ntBASIC-0.47□□□□□ -2.48
SMCO4Q9NRQ5 AC005094.1-201ENST00000440420 368 ntBASIC-0.47□□□□□ -2.48
SMCO4Q9NRQ5 AC104982.1-201ENST00000478775 574 ntBASIC-0.47□□□□□ -2.48
SMCO4Q9NRQ5 HMGB1P30-201ENST00000492455 606 ntBASIC-0.47□□□□□ -2.48
SMCO4Q9NRQ5 AK3P2-201ENST00000507976 429 ntBASIC-0.47□□□□□ -2.48
SMCO4Q9NRQ5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.47□□□□□ -2.48
SMCO4Q9NRQ5 RMST_4.1-201ENST00000616886 107 ntBASIC-0.47□□□□□ -2.48
SMCO4Q9NRQ5 AC120349.3-201ENST00000624377 529 ntBASIC-0.47□□□□□ -2.48
SMCO4Q9NRQ5 PPP1R11P2-201ENST00000423543 382 ntBASIC-0.48□□□□□ -2.49
SMCO4Q9NRQ5 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
SMCO4Q9NRQ5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.48□□□□□ -2.49
SMCO4Q9NRQ5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.48□□□□□ -2.49
SMCO4Q9NRQ5 RNU6-91P-201ENST00000607774 107 ntBASIC-0.48□□□□□ -2.49
SMCO4Q9NRQ5 AC013476.2-201ENST00000614456 459 ntBASIC-0.48□□□□□ -2.49
SMCO4Q9NRQ5 AC017104.5-201ENST00000637647 639 ntBASIC-0.48□□□□□ -2.49
SMCO4Q9NRQ5 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC-0.49□□□□□ -2.49
SMCO4Q9NRQ5 MIR140-201ENST00000385282 100 ntBASIC-0.49□□□□□ -2.49
SMCO4Q9NRQ5 RNA5SP222-201ENST00000411039 105 ntBASIC-0.49□□□□□ -2.49
SMCO4Q9NRQ5 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.49□□□□□ -2.49
SMCO4Q9NRQ5 AC092001.1-201ENST00000453012 261 ntBASIC-0.49□□□□□ -2.49
SMCO4Q9NRQ5 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC-0.49□□□□□ -2.49
SMCO4Q9NRQ5 RNA5SP220-201ENST00000516298 104 ntBASIC-0.49□□□□□ -2.49
SMCO4Q9NRQ5 RN7SKP258-201ENST00000517151 304 ntBASIC-0.49□□□□□ -2.49
SMCO4Q9NRQ5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
SMCO4Q9NRQ5 AL031281.1-201ENST00000604049 488 ntBASIC-0.49□□□□□ -2.49
SMCO4Q9NRQ5 AL139344.1-201ENST00000605228 195 ntBASIC-0.49□□□□□ -2.49
SMCO4Q9NRQ5 AL031775.1-201ENST00000607014 887 ntBASIC-0.49□□□□□ -2.49
SMCO4Q9NRQ5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC-0.49□□□□□ -2.49
SMCO4Q9NRQ5 RNU6-222P-201ENST00000362438 107 ntBASIC-0.5□□□□□ -2.49
SMCO4Q9NRQ5 U8.7-201ENST00000364940 136 ntBASIC-0.5□□□□□ -2.49
SMCO4Q9NRQ5 RNY1P8-201ENST00000383970 114 ntBASIC-0.5□□□□□ -2.49
SMCO4Q9NRQ5 RNA5SP63-201ENST00000391225 112 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms