Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL353743.1-202ENST00000431724 1695 ntBASIC4□□□□□ -1.77
PDLIM7Q9NR12 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM7Q9NR12 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4□□□□□ -1.77
PDLIM7Q9NR12 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM7Q9NR12 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4□□□□□ -1.77
PDLIM7Q9NR12 RNU6-428P-201ENST00000362942 107 ntBASIC4□□□□□ -1.77
PDLIM7Q9NR12 Y_RNA.478-201ENST00000384358 107 ntBASIC4□□□□□ -1.77
PDLIM7Q9NR12 RNU4-61P-201ENST00000411243 107 ntBASIC4□□□□□ -1.77
PDLIM7Q9NR12 DBIP2-201ENST00000419076 262 ntBASIC4□□□□□ -1.77
PDLIM7Q9NR12 AC139712.2-201ENST00000424302 339 ntBASIC4□□□□□ -1.77
PDLIM7Q9NR12 AC079354.2-201ENST00000453523 154 ntBASIC4□□□□□ -1.77
PDLIM7Q9NR12 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4□□□□□ -1.77
PDLIM7Q9NR12 ATP5F1P5-201ENST00000526403 760 ntBASIC4□□□□□ -1.77
PDLIM7Q9NR12 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
PDLIM7Q9NR12 SYF2P1-201ENST00000550658 413 ntBASIC4□□□□□ -1.77
PDLIM7Q9NR12 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4□□□□□ -1.77
PDLIM7Q9NR12 AL110115.1-201ENST00000614396 364 ntBASIC4□□□□□ -1.77
PDLIM7Q9NR12 AC090617.7-201ENST00000623952 126 ntBASIC4□□□□□ -1.77
PDLIM7Q9NR12 AC058791.1-201ENST00000608412 3198 ntBASIC4□□□□□ -1.77
PDLIM7Q9NR12 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM7Q9NR12 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM7Q9NR12 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM7Q9NR12 AC118273.1-201ENST00000525324 3006 ntBASIC4□□□□□ -1.77
PDLIM7Q9NR12 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 RNA5SP374-201ENST00000362939 125 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 RNA5SP42-201ENST00000364278 115 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 AC017079.2-201ENST00000416102 485 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 NDUFB4P7-201ENST00000423198 363 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 AC007560.1-201ENST00000426912 237 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 MTCO3P29-201ENST00000432119 779 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 MTND5P15-201ENST00000434246 349 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 PHBP14-201ENST00000512887 367 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 RNU6-579P-201ENST00000516879 102 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 SNORA31.19-201ENST00000517079 126 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 AC109479.2-201ENST00000517842 174 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 AL590705.4-201ENST00000532209 134 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 AL355877.2-201ENST00000603670 358 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 AL645944.1-201ENST00000603857 493 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 MIR486-1-201ENST00000612171 68 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 AC090132.2-201ENST00000615881 347 ntBASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM7Q9NR12 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 CUL1P1-201ENST00000509510 2425 ntBASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 SNORD17-201ENST00000390930 237 ntBASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 SNORA40C-201ENST00000391285 128 ntBASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 RNU2-25P-201ENST00000411041 191 ntBASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 AL590135.1-201ENST00000422215 156 ntBASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 TMEM167AP1-201ENST00000423409 219 ntBASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 PIGFP3-201ENST00000441918 722 ntBASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 RPS29P27-201ENST00000463711 170 ntBASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 KC877373.1-201ENST00000479066 408 ntBASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 RNU6-138P-201ENST00000515952 107 ntBASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 AC007656.2-201ENST00000624902 4547 ntBASIC3.98□□□□□ -1.77
PDLIM7Q9NR12 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 Y_RNA.27-201ENST00000362540 103 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 Y_RNA.84-201ENST00000363011 104 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 Y_RNA.117-201ENST00000363294 101 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 SNORD27-201ENST00000363981 72 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 Y_RNA.358-201ENST00000365491 99 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 Y_RNA.416-201ENST00000384014 113 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 Y_RNA.458-201ENST00000384240 102 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 RNU6-166P-201ENST00000384371 107 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 MIR215-201ENST00000384858 110 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 MIR190B-201ENST00000401119 79 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AP000567.1-201ENST00000406413 156 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AL591034.1-201ENST00000407447 340 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 RNU2-33P-201ENST00000410344 192 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 RNU6-1203P-201ENST00000410703 110 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AC013470.1-201ENST00000453438 462 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 RN7SL504P-201ENST00000494496 287 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 GZMAP1-201ENST00000503054 631 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms