Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 HMGN2P31-201ENST00000432430 273 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 Z82188.1-201ENST00000436709 154 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 AL353705.4-201ENST00000449661 238 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 CHEK2P4-201ENST00000450340 246 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 AP001324.2-201ENST00000461163 319 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 RPS4XP22-201ENST00000480755 780 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 AC016632.1-201ENST00000503994 196 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 DNAJC8P1-201ENST00000554535 372 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 AC104581.2-201ENST00000572227 430 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 7SK.7-201ENST00000603504 247 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 RPL23AP88-201ENST00000605759 454 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 RNVU1-4-201ENST00000612985 164 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 MIR8058-201ENST00000615737 89 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 MIR4272-201ENST00000635924 64 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 AC091564.4-201ENST00000533934 2194 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 RNU6-874P-201ENST00000362390 105 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 RNU6-1285P-201ENST00000363480 105 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 RNY3P11-201ENST00000364153 102 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 CD24P4-201ENST00000382840 243 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 Y_RNA.405-201ENST00000383979 100 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 SNORA29-201ENST00000384183 140 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 Y_RNA.451-201ENST00000384200 100 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 Y_RNA.485-201ENST00000384395 102 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 Y_RNA.524-201ENST00000384564 100 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 Y_RNA.561-201ENST00000384694 100 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 MIR200C-201ENST00000384980 68 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AC017083.1-201ENST00000428093 483 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 GPM6BP3-201ENST00000442797 145 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AL133547.1-201ENST00000448546 220 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AL353752.1-201ENST00000454946 260 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AL136097.1-201ENST00000456945 913 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 RPL23AP75-201ENST00000491601 451 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AF186996.7-201ENST00000492781 209 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 RNU6-475P-201ENST00000516073 104 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AC016256.1-201ENST00000547971 354 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AC007375.1-201ENST00000554513 578 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AC010928.2-201ENST00000588017 287 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AC012493.2-201ENST00000595083 291 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AC008737.2-201ENST00000599446 118 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AC006077.1-201ENST00000604746 343 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AL162730.1-201ENST00000605734 292 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AC087588.2-201ENST00000617667 426 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AC002064.3-201ENST00000623448 346 ntBASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM55Q9BYV6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 RNA5SP399-201ENST00000364003 117 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AL591419.1-201ENST00000427423 339 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AC078809.1-201ENST00000427601 140 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AC096644.2-201ENST00000429278 159 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 TBCAP1-201ENST00000436520 327 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AC244670.1-201ENST00000436879 112 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 OSTCP8-201ENST00000445117 448 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 RPS29P31-201ENST00000446147 164 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AC093663.1-201ENST00000497190 394 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 RNU7-175P-201ENST00000515915 61 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AC105137.2-201ENST00000569073 466 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 MIR5571-201ENST00000577998 113 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AC096772.1-201ENST00000609146 564 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AC069200.1-201ENST00000609511 323 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AL121772.2-201ENST00000614331 297 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AC007792.1-201ENST00000623023 402 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 AC138305.3-201ENST00000624988 240 ntBASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM55Q9BYV6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AC092268.1-201ENST00000342691 405 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 Y_RNA.645-201ENST00000391229 102 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 MIR190B-201ENST00000401119 79 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 MTHFD2P2-201ENST00000407725 247 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 SNORA11.1-201ENST00000408133 129 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms