Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.46□□□□□ -1.7
TRAIPQ9BWF2 AL034555.1-201ENST00000604816 211 ntBASIC4.46□□□□□ -1.7
TRAIPQ9BWF2 AL162730.1-201ENST00000605734 292 ntBASIC4.46□□□□□ -1.7
TRAIPQ9BWF2 AC008785.1-201ENST00000624475 456 ntBASIC4.46□□□□□ -1.7
TRAIPQ9BWF2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.46□□□□□ -1.7
TRAIPQ9BWF2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.46□□□□□ -1.7
TRAIPQ9BWF2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 AC073073.2-201ENST00000609827 2578 ntBASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 ZNF72P-201ENST00000425869 1908 ntBASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 Y_RNA.455-201ENST00000384230 98 ntBASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 Y_RNA.485-201ENST00000384395 102 ntBASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 Y_RNA.527-201ENST00000384573 102 ntBASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 MIR320B2-201ENST00000408479 138 ntBASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 RNU6-985P-201ENST00000410182 104 ntBASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 RN7SKP202-201ENST00000410439 330 ntBASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 HMGB1P37-201ENST00000439613 609 ntBASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 AC090617.3-201ENST00000573670 475 ntBASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 MIR5684-201ENST00000585074 65 ntBASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 AC124312.5-201ENST00000604451 268 ntBASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 MIR7702-201ENST00000621931 59 ntBASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.45□□□□□ -1.7
TRAIPQ9BWF2 Y_RNA.152-201ENST00000363578 100 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 Y_RNA.319-201ENST00000365138 92 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 RNU6-213P-201ENST00000384051 104 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 MIR208B-201ENST00000401172 77 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 MTND5P22-201ENST00000458380 195 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 snoU13.6-201ENST00000458785 104 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 SNORA84-201ENST00000459229 133 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 AC006517.1-201ENST00000480485 328 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 SNORA67.7-201ENST00000516664 135 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 AC022616.4-201ENST00000522985 181 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 MIR5188-201ENST00000583467 113 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 SNORD58B-201ENST00000607313 66 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 MIR7515-201ENST00000637837 67 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 AC016588.2-201ENST00000632484 3021 ntBASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRAIPQ9BWF2 MTND5P16-201ENST00000460269 1703 ntBASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 RNU6-137P-201ENST00000363680 108 ntBASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 RNU5F-3P-201ENST00000363767 117 ntBASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 AC113618.1-201ENST00000416747 285 ntBASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 RPS3AP12-201ENST00000443616 753 ntBASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 AC112492.4-201ENST00000456549 352 ntBASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 AC093852.1-201ENST00000503587 266 ntBASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 RNA5SP54-201ENST00000516951 92 ntBASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 AL606490.9-201ENST00000603331 271 ntBASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 AC136443.5-201ENST00000603741 370 ntBASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 AC026241.1-201ENST00000517873 2142 ntBASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRAIPQ9BWF2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 SNORD21-201ENST00000383953 95 ntBASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 RNU6-1093P-201ENST00000391194 107 ntBASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 CBX3P9-201ENST00000402326 552 ntBASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 CYCSP19-201ENST00000411715 316 ntBASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 RN7SL542P-201ENST00000467147 294 ntBASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 AL121594.1-201ENST00000475906 575 ntBASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 MIR6868-201ENST00000611215 58 ntBASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 MIR6500-201ENST00000622700 86 ntBASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 AL078596.1-201ENST00000624856 447 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 207.4 ms