Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 GZMAP1-201ENST00000503054 631 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 RNU1-86P-201ENST00000516108 154 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 RNA5SP320-201ENST00000516263 124 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 RNU1-107P-201ENST00000516617 154 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 SNORD19.2-201ENST00000516978 73 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 AF235103.2-201ENST00000525753 346 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 AL118558.2-201ENST00000556294 238 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 AC021739.1-201ENST00000559631 174 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 AC009127.3-201ENST00000570531 403 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 AC060780.3-201ENST00000589464 80 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 AL451007.1-201ENST00000595491 289 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 AC092807.2-201ENST00000609367 243 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 AC006504.8-201ENST00000621046 635 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 MIR1291-201ENST00000627649 87 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 MIR3199-2-201ENST00000636243 86 ntBASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CCDC28BQ9BUN5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 Y_RNA.100-201ENST00000363141 102 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 RNU6-1283P-201ENST00000365314 105 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 Y_RNA.378-201ENST00000365652 113 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 MIR10A-201ENST00000385043 110 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 AL359511.1-201ENST00000402970 211 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 RAP1BP3-201ENST00000407180 549 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 RNU2-40P-201ENST00000410833 196 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 AC023141.4-201ENST00000412031 328 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 AC009414.1-201ENST00000427200 443 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 TOMM20P4-201ENST00000427861 435 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 IPO7P1-201ENST00000442031 636 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 IFNA11P-201ENST00000446352 526 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 WASF1P1-201ENST00000447560 1131 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 PRDX4P1-201ENST00000507189 574 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 SNORA14.1-201ENST00000516113 141 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 AC069113.1-201ENST00000517763 267 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 AL133241.1-201ENST00000556832 487 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 AC105137.2-201ENST00000569073 466 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 SNORD53-201ENST00000579969 78 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 ELOCP29-201ENST00000588193 334 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 AC002984.1-201ENST00000591692 448 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 VN1R80P-201ENST00000597126 338 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 AL356280.1-201ENST00000603614 379 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 AC092747.3-201ENST00000603769 301 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 AC092608.2-201ENST00000624427 218 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 AC009487.4-201ENST00000624969 3585 ntBASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC28BQ9BUN5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 Y_RNA.167-201ENST00000363735 109 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 SNORA68.1-201ENST00000364537 132 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 Y_RNA.324-201ENST00000365165 102 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 SNORA6-201ENST00000384033 151 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 MIR518C-201ENST00000384822 101 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 RNA5SP219-201ENST00000390940 113 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 RNU6-332P-201ENST00000391193 108 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 RNA5SP354-201ENST00000391247 136 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 SNORA48.7-201ENST00000391302 135 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 AC009161.1-201ENST00000417306 376 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 AC009296.1-201ENST00000443146 155 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 AL358232.1-201ENST00000448030 501 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 snoU13.22-201ENST00000459428 104 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 AC069439.1-201ENST00000494739 167 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 MTCYBP18-201ENST00000501056 747 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 SNORA25.17-201ENST00000517184 124 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 AC109329.2-201ENST00000519658 482 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 AC024220.1-201ENST00000603675 484 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 SCARNA4-202ENST00000625402 129 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 ADAM3A-203ENST00000461344 2157 ntBASIC2.27□□□□□ -2.05
CCDC28BQ9BUN5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC28BQ9BUN5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
CCDC28BQ9BUN5 RNU6-266P-201ENST00000364225 107 ntBASIC2.26□□□□□ -2.05
CCDC28BQ9BUN5 RNU6-72P-201ENST00000384285 79 ntBASIC2.26□□□□□ -2.05
CCDC28BQ9BUN5 Y_RNA.530-201ENST00000384587 101 ntBASIC2.26□□□□□ -2.05
CCDC28BQ9BUN5 MIR767-201ENST00000390228 109 ntBASIC2.26□□□□□ -2.05
CCDC28BQ9BUN5 RNU6-750P-201ENST00000390946 107 ntBASIC2.26□□□□□ -2.05
CCDC28BQ9BUN5 EIF4E2P1-201ENST00000393781 255 ntBASIC2.26□□□□□ -2.05
CCDC28BQ9BUN5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms