Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 HMGB1P30-201ENST00000492455 606 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 RNU6-991P-201ENST00000516168 107 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 ACA64.5-201ENST00000516207 127 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 RNU6-1315P-201ENST00000517187 99 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AC092325.1-201ENST00000566449 554 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 MIR4661-201ENST00000582720 75 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 MIR4769-201ENST00000584126 77 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AC112220.3-201ENST00000605502 502 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AC018926.1-201ENST00000616335 435 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AC009033.1-201ENST00000624279 431 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AC095038.3-201ENST00000634439 195 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 LINC02555-201ENST00000563933 1951 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
LIMD2Q9BT23 AC008163.1-202ENST00000636004 2889 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
LIMD2Q9BT23 RNU6-858P-201ENST00000362436 107 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 RNU6-392P-201ENST00000364926 101 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 MIR194-1-201ENST00000384892 85 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 MIR532-201ENST00000385025 91 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 MRPL35P1-201ENST00000404272 572 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 AC016831.2-201ENST00000417179 352 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 EBAG9P1-201ENST00000418955 543 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 AC083875.1-201ENST00000419509 405 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.53□□□□□ -2.32
LIMD2Q9BT23 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
LIMD2Q9BT23 RPS15AP10-201ENST00000432472 382 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.53□□□□□ -2.32
LIMD2Q9BT23 MTND1P30-201ENST00000441241 901 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 NEFMP1-201ENST00000443423 1006 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 KATNBL1P3-201ENST00000443475 909 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 RPS29P29-201ENST00000456396 171 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.53□□□□□ -2.32
LIMD2Q9BT23 AC134050.1-201ENST00000495088 933 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.53□□□□□ -2.32
LIMD2Q9BT23 RNU6-150P-201ENST00000516237 95 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 CYCSP23-201ENST00000519781 313 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 MTND1P36-201ENST00000522384 936 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.53□□□□□ -2.32
LIMD2Q9BT23 AL512310.8-201ENST00000550183 120 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
LIMD2Q9BT23 MIR3937-201ENST00000580135 106 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.53□□□□□ -2.32
LIMD2Q9BT23 AL391646.1-201ENST00000603860 190 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 AC007363.1-201ENST00000604736 620 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 AC078880.5-201ENST00000617845 421 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 MTND5P42-201ENST00000637720 498 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 MIR6866-201ENST00000638146 69 ntBASIC0.53□□□□□ -2.32
LIMD2Q9BT23 AC100821.1-201ENST00000523153 2479 ntBASIC0.53□□□□□ -2.33
LIMD2Q9BT23 RNU6-743P-201ENST00000364151 106 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 SNORA4.3-201ENST00000365564 137 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.52□□□□□ -2.33
LIMD2Q9BT23 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.52□□□□□ -2.33
LIMD2Q9BT23 SNORA25-201ENST00000384384 134 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 MIR520A-201ENST00000384862 85 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 MIR515-2-201ENST00000384883 83 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 MIR515-1-201ENST00000384884 83 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
LIMD2Q9BT23 Y_RNA.597-201ENST00000410463 100 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 RNU6-1025P-201ENST00000410629 104 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 RN7SKP61-201ENST00000410642 295 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 PIGFP2-201ENST00000421400 651 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 RPS27AP8-201ENST00000452665 445 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 AC009646.1-201ENST00000510455 318 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 AC108078.2-201ENST00000510750 236 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
LIMD2Q9BT23 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
LIMD2Q9BT23 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.52□□□□□ -2.33
LIMD2Q9BT23 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.52□□□□□ -2.33
LIMD2Q9BT23 MTATP6P25-201ENST00000574491 261 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 AC174048.1-201ENST00000603389 144 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 MZT1P2-201ENST00000604387 248 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 RPL21P136-201ENST00000605378 396 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 AC211469.2-201ENST00000605461 205 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.52□□□□□ -2.33
LIMD2Q9BT23 AL365204.3-201ENST00000612448 685 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 AC007792.1-201ENST00000623023 402 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 AL136313.1-201ENST00000624804 202 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 AL512643.1-201ENST00000635735 524 ntBASIC0.52□□□□□ -2.33
LIMD2Q9BT23 Y_RNA.33-201ENST00000362591 102 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 RNU6-701P-201ENST00000384059 107 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 MIR19B1-201ENST00000384829 87 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 RNU11-5P-201ENST00000391216 129 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 RPL23AP32-201ENST00000395315 459 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AL357139.1-201ENST00000407792 426 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.51□□□□□ -2.33
LIMD2Q9BT23 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AL365338.1-201ENST00000422282 858 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.51□□□□□ -2.33
LIMD2Q9BT23 MTND4P25-201ENST00000441039 533 ntBASIC0.51□□□□□ -2.33
LIMD2Q9BT23 AP000542.1-201ENST00000448473 371 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms