Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 RNU6-105P-201ENST00000363909 104 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 SNORA20.1-201ENST00000364790 130 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 RNA5SP283-201ENST00000365604 119 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 Y_RNA.539-201ENST00000384635 107 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 U3.37-201ENST00000408528 213 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 RNU2-25P-201ENST00000411041 191 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 SDAD1P3-201ENST00000427380 333 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 AL117339.2-201ENST00000430475 180 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 SUMO1P2-201ENST00000452524 304 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 RN7SL132P-201ENST00000478131 296 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 MRPS36P4-201ENST00000534436 298 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 AC022080.3-201ENST00000544433 482 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 AC120057.2-201ENST00000571520 271 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 AC010928.2-201ENST00000588017 287 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 AL451007.1-201ENST00000595491 289 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 MIR3199-2-201ENST00000636243 86 ntBASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.76□□□□□ -1.81
YIPF4Q9BSR8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 MAPK10-322ENST00000641485 4530 ntBASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 MIR372-201ENST00000362225 67 ntBASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 RNU6-212P-201ENST00000362642 104 ntBASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 RNU4-70P-201ENST00000384579 139 ntBASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 MTHFD2P2-201ENST00000407725 247 ntBASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 RNU2-14P-201ENST00000411053 191 ntBASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 AL358453.1-201ENST00000422522 250 ntBASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 RN7SKP210-201ENST00000459176 261 ntBASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 AP002770.2-201ENST00000543613 532 ntBASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 AC021739.1-201ENST00000559631 174 ntBASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 MIR4644-201ENST00000579929 84 ntBASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 MIR6868-201ENST00000611215 58 ntBASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
YIPF4Q9BSR8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 SNORA60-201ENST00000362396 134 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 RNU6-942P-201ENST00000363002 107 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 RNA5SP130-201ENST00000364431 114 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 Y_RNA.237-201ENST00000364439 102 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 MIR1251-201ENST00000408552 70 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 MTND2P29-201ENST00000438595 412 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 ADAM3A-203ENST00000461344 2157 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 TOMM22P6-201ENST00000465035 409 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 HMGB1P35-201ENST00000503360 598 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 RNU6-138P-201ENST00000515952 107 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 SNORA43.2-201ENST00000516652 128 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 RNU1-45P-201ENST00000517191 141 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 IGKV2-23-201ENST00000518729 323 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 AP004607.1-201ENST00000524456 203 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 RPL23AP78-201ENST00000599928 470 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 MIR8058-201ENST00000615737 89 ntBASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
YIPF4Q9BSR8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.73□□□□□ -1.81
YIPF4Q9BSR8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.73□□□□□ -1.81
YIPF4Q9BSR8 RNU6-222P-201ENST00000362438 107 ntBASIC3.73□□□□□ -1.81
YIPF4Q9BSR8 Y_RNA.20-201ENST00000362479 113 ntBASIC3.73□□□□□ -1.81
YIPF4Q9BSR8 U1.1-201ENST00000384101 164 ntBASIC3.73□□□□□ -1.81
YIPF4Q9BSR8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
YIPF4Q9BSR8 SNORD115-46-201ENST00000390982 71 ntBASIC3.73□□□□□ -1.81
YIPF4Q9BSR8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
YIPF4Q9BSR8 MTCYBP2-201ENST00000407745 171 ntBASIC3.73□□□□□ -1.81
YIPF4Q9BSR8 AP000275.1-201ENST00000411943 390 ntBASIC3.73□□□□□ -1.81
YIPF4Q9BSR8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.73□□□□□ -1.81
YIPF4Q9BSR8 AL590135.1-201ENST00000422215 156 ntBASIC3.73□□□□□ -1.81
YIPF4Q9BSR8 AL365496.1-201ENST00000426885 215 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms