Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AL354685.2-201ENST00000448218 1447 ntBASIC2.74□□□□□ -1.97
SDF4Q9BRK5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AC069528.2-201ENST00000624849 1991 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SDF4Q9BRK5 RNA5SP289-201ENST00000362332 137 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 RNA5SP240-201ENST00000365355 128 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 MIR95-201ENST00000385072 81 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 RNU2-23P-201ENST00000410545 195 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 RNU2-63P-201ENST00000410792 194 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.73□□□□□ -1.97
SDF4Q9BRK5 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AL606489.2-201ENST00000433886 234 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AC073901.1-201ENST00000462471 408 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AC090515.1-201ENST00000465295 476 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AP005902.1-201ENST00000521358 186 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AC104383.1-201ENST00000530297 370 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AC023050.3-201ENST00000541142 333 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.73□□□□□ -1.97
SDF4Q9BRK5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 uc_338.15-201ENST00000615470 191 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
SDF4Q9BRK5 U4atac.1-201ENST00000618345 95 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AC139792.3-201ENST00000623525 224 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 AP003400.5-201ENST00000624827 617 ntBASIC2.73□□□□□ -1.97
SDF4Q9BRK5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SDF4Q9BRK5 SNORD114-30-201ENST00000364448 72 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 Y_RNA.481-201ENST00000384373 102 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 MIR186-201ENST00000384988 86 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 RNU6-1140P-201ENST00000410517 106 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AC007064.1-201ENST00000412238 351 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AC008267.5-201ENST00000424928 265 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.72□□□□□ -1.97
SDF4Q9BRK5 CYP2C59P-201ENST00000457790 269 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 RNU7-167P-201ENST00000459160 62 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AC083798.1-201ENST00000472671 131 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 RN7SL429P-201ENST00000479090 223 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.72□□□□□ -1.97
SDF4Q9BRK5 RN7SL489P-201ENST00000486185 223 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 RN7SL327P-201ENST00000488659 223 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AC107401.1-201ENST00000503426 685 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AC109479.2-201ENST00000517842 174 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SDF4Q9BRK5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.72□□□□□ -1.97
SDF4Q9BRK5 SNORD53-201ENST00000579969 78 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AL713866.2-201ENST00000603579 219 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AC004908.3-201ENST00000610248 625 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AC013412.1-201ENST00000610687 192 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SDF4Q9BRK5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SDF4Q9BRK5 RN7SL853P-201ENST00000617250 223 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AC124864.2-201ENST00000624736 186 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 MIR1291-201ENST00000627649 87 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 OR5AK4P-201ENST00000635912 903 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SDF4Q9BRK5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.72□□□□□ -1.97
SDF4Q9BRK5 AC080100.1-201ENST00000624239 5356 ntBASIC2.72□□□□□ -1.97
SDF4Q9BRK5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
SDF4Q9BRK5 RNU6-1322P-201ENST00000364309 107 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.71□□□□□ -1.98
SDF4Q9BRK5 RNU4-53P-201ENST00000410828 140 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.71□□□□□ -1.98
SDF4Q9BRK5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.71□□□□□ -1.98
SDF4Q9BRK5 CR769767.1-201ENST00000436337 346 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 AC016691.1-201ENST00000441321 413 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 FDX1P2-201ENST00000450769 375 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 snoU13.14-201ENST00000459372 104 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 AC140059.1-201ENST00000489238 361 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.71□□□□□ -1.98
SDF4Q9BRK5 SNORA31.15-201ENST00000516771 132 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 MTND4P7-201ENST00000523876 130 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 AC087241.2-201ENST00000535801 324 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.71□□□□□ -1.98
SDF4Q9BRK5 AC091544.4-201ENST00000555268 342 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 MIR4298-201ENST00000584380 73 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 MIR4424-201ENST00000585257 86 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 AC067747.1-201ENST00000608026 250 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 AC103591.3-201ENST00000608684 209 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 AL158209.2-201ENST00000619266 216 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 MIR6863-201ENST00000636112 90 ntBASIC2.71□□□□□ -1.98
SDF4Q9BRK5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SDF4Q9BRK5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SDF4Q9BRK5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-37P-201ENST00000362692 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 SNORD56.1-201ENST00000362913 68 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-529P-201ENST00000363383 104 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-11P-201ENST00000364234 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-25P-201ENST00000383873 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-1-201ENST00000383898 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-48P-201ENST00000384161 107 ntBASIC2.7□□□□□ -1.98
SDF4Q9BRK5 RNU6-36P-201ENST00000384172 107 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms