Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.25□□□□□ -1.89
VRK1Q99986 TRBV12-2-201ENST00000489763 344 ntBASIC3.25□□□□□ -1.89
VRK1Q99986 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.25□□□□□ -1.89
VRK1Q99986 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.25□□□□□ -1.89
VRK1Q99986 RNU1-95P-201ENST00000516357 160 ntBASIC3.25□□□□□ -1.89
VRK1Q99986 RNU1-128P-201ENST00000516704 160 ntBASIC3.25□□□□□ -1.89
VRK1Q99986 AC016256.1-201ENST00000547971 354 ntBASIC3.25□□□□□ -1.89
VRK1Q99986 AC090877.1-201ENST00000561418 344 ntBASIC3.25□□□□□ -1.89
VRK1Q99986 AC010653.1-201ENST00000571108 881 ntBASIC3.25□□□□□ -1.89
VRK1Q99986 MIR4425-201ENST00000580572 84 ntBASIC3.25□□□□□ -1.89
VRK1Q99986 AC060766.3-201ENST00000591442 263 ntBASIC3.25□□□□□ -1.89
VRK1Q99986 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.25□□□□□ -1.89
VRK1Q99986 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.25□□□□□ -1.89
VRK1Q99986 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.25□□□□□ -1.89
VRK1Q99986 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VRK1Q99986 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VRK1Q99986 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.25□□□□□ -1.89
VRK1Q99986 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VRK1Q99986 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VRK1Q99986 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VRK1Q99986 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
VRK1Q99986 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VRK1Q99986 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.24□□□□□ -1.89
VRK1Q99986 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VRK1Q99986 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 RNU6-1141P-201ENST00000364520 107 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 SNORA63C-201ENST00000364578 129 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 MIR544A-201ENST00000384855 91 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 MIR7-3-201ENST00000384898 110 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VRK1Q99986 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VRK1Q99986 SNORA48.8-201ENST00000391324 134 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.24□□□□□ -1.89
VRK1Q99986 MTCYBP2-201ENST00000407745 171 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 RNA5SP44-201ENST00000410446 133 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.24□□□□□ -1.89
VRK1Q99986 MTCYBP10-201ENST00000424905 650 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VRK1Q99986 YME1L1P1-201ENST00000429435 297 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.24□□□□□ -1.89
VRK1Q99986 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.24□□□□□ -1.89
VRK1Q99986 RN7SKP210-201ENST00000459176 261 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.24□□□□□ -1.89
VRK1Q99986 RPS26P21-201ENST00000475397 348 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.24□□□□□ -1.89
VRK1Q99986 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.24□□□□□ -1.89
VRK1Q99986 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.24□□□□□ -1.89
VRK1Q99986 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VRK1Q99986 MIR4738-201ENST00000579134 87 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 AL360085.1-201ENST00000604713 532 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 AC006157.1-201ENST00000611750 366 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VRK1Q99986 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VRK1Q99986 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.24□□□□□ -1.89
VRK1Q99986 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VRK1Q99986 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.24□□□□□ -1.89
VRK1Q99986 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VRK1Q99986 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VRK1Q99986 AC091564.4-201ENST00000533934 2194 ntBASIC3.24□□□□□ -1.89
VRK1Q99986 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
VRK1Q99986 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
VRK1Q99986 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VRK1Q99986 RNU6-99P-201ENST00000364721 107 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 RNU1-140P-201ENST00000365040 165 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 RNU6-1286P-201ENST00000383871 107 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 SNORA5A-201ENST00000384111 134 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 U8.11-201ENST00000384699 133 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 U8.12-201ENST00000384701 133 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 MIR449B-201ENST00000384995 97 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VRK1Q99986 RNU6-1156P-201ENST00000410365 100 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 RN7SKP61-201ENST00000410642 295 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 MRPS18CP6-201ENST00000423587 223 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 U8.18-201ENST00000459285 133 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 RNU6-327P-201ENST00000516270 127 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 RNU6-1045P-201ENST00000516321 107 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VRK1Q99986 AL590705.4-201ENST00000532209 134 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 GNAI2P1-201ENST00000541815 315 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 AC008011.1-201ENST00000545989 227 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.23□□□□□ -1.89
VRK1Q99986 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.23□□□□□ -1.89
VRK1Q99986 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.23□□□□□ -1.89
VRK1Q99986 MIR4444-1-201ENST00000581696 74 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 MIR4444-2-201ENST00000584390 74 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.23□□□□□ -1.89
VRK1Q99986 AC007485.1-201ENST00000616755 206 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 AC119674.1-207ENST00000641355 633 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 AC002543.1-201ENST00000299783 1954 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VRK1Q99986 MTND5P1-201ENST00000445440 1375 ntBASIC3.23□□□□□ -1.89
VRK1Q99986 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.23□□□□□ -1.89
VRK1Q99986 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VRK1Q99986 AC073073.2-201ENST00000609827 2578 ntBASIC3.22□□□□□ -1.89
VRK1Q99986 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
VRK1Q99986 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.22□□□□□ -1.89
VRK1Q99986 Y_RNA.80-201ENST00000362996 102 ntBASIC3.22□□□□□ -1.89
VRK1Q99986 RNU6-799P-201ENST00000363567 107 ntBASIC3.22□□□□□ -1.89
VRK1Q99986 Y_RNA.158-201ENST00000363651 101 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms