Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXC2Q99958 SCARNA24.1-201ENST00000516465 137 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 RNU7-51P-201ENST00000516560 62 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXC2Q99958 AC107953.1-201ENST00000522216 297 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXC2Q99958 AL356057.1-201ENST00000533798 831 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.73□□□□□ -2.13
FOXC2Q99958 AC110588.1-201ENST00000559699 137 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 AC136619.2-201ENST00000563361 631 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXC2Q99958 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.73□□□□□ -2.13
FOXC2Q99958 AC073114.1-201ENST00000612027 490 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 AC022202.1-201ENST00000613515 211 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 AL158063.1-201ENST00000615349 536 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 AC092656.1-203ENST00000624134 423 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 CKAP2P1-201ENST00000555477 2049 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 AC103710.2-202ENST00000641454 2853 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 Y_RNA.77-201ENST00000362962 107 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 RNU6-348P-201ENST00000384386 107 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 MIR489-201ENST00000384923 84 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 RNU2-8P-201ENST00000410727 190 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 AC092809.3-201ENST00000415453 231 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 MTND1P23-201ENST00000416931 372 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.72□□□□□ -2.13
FOXC2Q99958 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXC2Q99958 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXC2Q99958 AC119618.1-201ENST00000434191 222 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.72□□□□□ -2.13
FOXC2Q99958 RPS24P1-201ENST00000438550 371 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.72□□□□□ -2.13
FOXC2Q99958 RNA5SP233-201ENST00000459153 113 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 snoU13.18-201ENST00000459483 104 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 AC018868.1-201ENST00000491307 315 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 AC104564.1-201ENST00000493028 407 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 AC005840.1-201ENST00000498412 377 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 MTCO3P28-201ENST00000513351 515 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 SNORA4.4-201ENST00000515921 135 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 Y_RNA.689-201ENST00000516589 107 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 AC034114.1-201ENST00000520293 285 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.72□□□□□ -2.13
FOXC2Q99958 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.72□□□□□ -2.13
FOXC2Q99958 SUB1P3-201ENST00000564581 315 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 AC092325.1-201ENST00000566449 554 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 MIR3683-201ENST00000580847 82 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 MIR3682-201ENST00000581338 84 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
FOXC2Q99958 AC010620.1-201ENST00000601088 1102 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 AC064872.1-201ENST00000604823 1072 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 NDUFA8P1-201ENST00000605525 367 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 AC091834.1-201ENST00000614543 472 ntBASIC1.72□□□□□ -2.13
FOXC2Q99958 ELL2P3-201ENST00000457883 1602 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 SNORA20.2-201ENST00000383922 131 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 SNORD116-9-201ENST00000384000 95 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 SNORA75B-201ENST00000384053 137 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 RNU6-190P-201ENST00000384154 102 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 SNORD116-3-201ENST00000384287 95 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 SNORD116-1-201ENST00000384335 95 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 SNORD116-7-201ENST00000384404 95 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 SNORD116-5-201ENST00000384462 95 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
FOXC2Q99958 RN7SKP142-201ENST00000411236 328 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 RNU6-195P-201ENST00000411352 109 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AC016831.2-201ENST00000417179 352 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXC2Q99958 AL445685.2-201ENST00000422551 342 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.71□□□□□ -2.14
FOXC2Q99958 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AC073614.1-201ENST00000438690 650 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.71□□□□□ -2.14
FOXC2Q99958 Z83846.1-201ENST00000446798 265 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AL136380.1-201ENST00000447970 162 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.71□□□□□ -2.14
FOXC2Q99958 ARL2BPP4-201ENST00000506854 471 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.71□□□□□ -2.14
FOXC2Q99958 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
FOXC2Q99958 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 Vault.3-201ENST00000516676 95 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 MIR514B-201ENST00000516774 80 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AC109329.1-201ENST00000518744 317 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXC2Q99958 AC087883.1-201ENST00000551882 391 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AC025678.1-201ENST00000567861 338 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 LRRC37A5P-203ENST00000580181 585 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AL109918.3-201ENST00000603072 338 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AL022154.1-201ENST00000604698 785 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AC008250.2-201ENST00000615261 205 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.71□□□□□ -2.14
FOXC2Q99958 MIR3529-201ENST00000637713 78 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
FOXC2Q99958 AL359851.1-201ENST00000569460 4997 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 AC008555.8-201ENST00000623602 2168 ntBASIC1.71□□□□□ -2.14
FOXC2Q99958 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXC2Q99958 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
FOXC2Q99958 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
FOXC2Q99958 RNU6-1010P-201ENST00000362757 107 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 RNU6-457P-201ENST00000363999 107 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 RNY4P34-201ENST00000364779 95 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 RNA5SP190-201ENST00000365222 118 ntBASIC1.7□□□□□ -2.14
FOXC2Q99958 RNU6-61P-201ENST00000365528 109 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms