Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ELOCP5-201ENST00000604924 333 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 AC009318.2-201ENST00000610917 651 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 AC022202.1-201ENST00000613515 211 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 AL133173.2-201ENST00000614270 90 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 uc_338.20-201ENST00000621563 178 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 AC241585.2-209ENST00000638217 143 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 ELL2P3-201ENST00000457883 1602 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NPAS2Q99743 RNU6-1032P-201ENST00000384100 107 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 RNU2-8P-201ENST00000410727 190 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 AL031779.1-201ENST00000415663 330 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.92□□□□□ -2.1
NPAS2Q99743 AC114491.1-201ENST00000416095 246 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.92□□□□□ -2.1
NPAS2Q99743 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.92□□□□□ -2.1
NPAS2Q99743 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.92□□□□□ -2.1
NPAS2Q99743 AL365400.1-201ENST00000431854 640 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.92□□□□□ -2.1
NPAS2Q99743 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.92□□□□□ -2.1
NPAS2Q99743 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.92□□□□□ -2.1
NPAS2Q99743 AL031667.1-201ENST00000440222 725 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 CALM1P1-201ENST00000442082 433 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.92□□□□□ -2.1
NPAS2Q99743 GAPDHP17-201ENST00000449858 1001 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.92□□□□□ -2.1
NPAS2Q99743 AL033528.1-201ENST00000453780 140 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 RNA5SP269-201ENST00000459032 137 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.92□□□□□ -2.1
NPAS2Q99743 AC108210.2-201ENST00000503681 201 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NPAS2Q99743 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.92□□□□□ -2.1
NPAS2Q99743 AP002453.2-201ENST00000533503 320 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.92□□□□□ -2.1
NPAS2Q99743 OR11H5P-201ENST00000554039 926 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 ANP32BP3-201ENST00000559213 706 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 DEFB122-202ENST00000569013 197 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.92□□□□□ -2.1
NPAS2Q99743 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
NPAS2Q99743 SNRPGP19-201ENST00000603826 189 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 Y_RNA.783-201ENST00000613546 102 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 AL158063.1-201ENST00000615349 536 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 Z69908.1-201ENST00000622603 247 ntBASIC1.92□□□□□ -2.1
NPAS2Q99743 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
NPAS2Q99743 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.92□□□□□ -2.1
NPAS2Q99743 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.91□□□□□ -2.1
NPAS2Q99743 RNU6-655P-201ENST00000362858 107 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 Y_RNA.201-201ENST00000364052 96 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 U3.13-201ENST00000364804 214 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 SNORA20.2-201ENST00000383922 131 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 SNORA24.1-201ENST00000384401 135 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 RNA5SP390-201ENST00000410191 113 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 RNU6-1140P-201ENST00000410517 106 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 RNU2-23P-201ENST00000410545 195 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 RNU6-248P-201ENST00000410720 107 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 RNA5SP450-201ENST00000411206 102 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 AL137159.1-201ENST00000452808 512 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.91□□□□□ -2.1
NPAS2Q99743 SNRPFP4-201ENST00000456366 242 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.91□□□□□ -2.1
NPAS2Q99743 snoU109.2-201ENST00000459316 135 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 snoU13.14-201ENST00000459372 104 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.91□□□□□ -2.1
NPAS2Q99743 RPL21P99-201ENST00000480369 423 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 AP001025.1-201ENST00000486139 332 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 Y_RNA.695-201ENST00000516715 107 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 SNORA18.6-201ENST00000516792 115 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.91□□□□□ -2.1
NPAS2Q99743 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.91□□□□□ -2.1
NPAS2Q99743 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.91□□□□□ -2.1
NPAS2Q99743 MIR5089-201ENST00000580047 84 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 AC090897.2-201ENST00000581715 130 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 DEFB131E-202ENST00000602581 683 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 AC108479.2-201ENST00000617314 601 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 YWHAEP7-203ENST00000622054 312 ntBASIC1.91□□□□□ -2.1
NPAS2Q99743 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.1
NPAS2Q99743 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NPAS2Q99743 Y_RNA.22-201ENST00000362492 102 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 RNU6-1210P-201ENST00000363775 107 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 RNU6-169P-201ENST00000365336 107 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 SNORD116-20-201ENST00000384529 92 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 RNU6-1179P-201ENST00000384667 107 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 MIR578-201ENST00000384828 96 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 MIR518A2-201ENST00000384966 87 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 RNA5SP489-201ENST00000410986 109 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 RNU6-387P-201ENST00000411331 105 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 BX295541.1-201ENST00000417774 250 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 RPL31P35-201ENST00000431058 377 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.9□□□□□ -2.11
NPAS2Q99743 AC009961.2-201ENST00000435771 251 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 AL353689.1-201ENST00000438895 199 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 DNAJC19P4-201ENST00000440115 345 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.9□□□□□ -2.11
NPAS2Q99743 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.9□□□□□ -2.11
NPAS2Q99743 RPL23AP3-201ENST00000453844 468 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 snoU109.1-201ENST00000459339 135 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 SNORD42A-201ENST00000459584 64 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 AL121594.1-201ENST00000475906 575 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms