Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.91□□□□□ -1.94
NPAS1Q99742 snoU13.22-201ENST00000459428 104 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.91□□□□□ -1.94
NPAS1Q99742 MRPS36P2-201ENST00000512569 299 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.91□□□□□ -1.94
NPAS1Q99742 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.91□□□□□ -1.94
NPAS1Q99742 RNU1-143P-201ENST00000516296 146 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 RNU6-1016P-201ENST00000516689 94 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 SNORA31.26-201ENST00000517250 137 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 AP005902.1-201ENST00000521358 186 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 MIR5680-201ENST00000577577 84 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 MIR3944-201ENST00000581277 108 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.91□□□□□ -1.94
NPAS1Q99742 AC008739.2-201ENST00000597006 317 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.91□□□□□ -1.94
NPAS1Q99742 AC073657.2-201ENST00000605661 303 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 AL627309.6-201ENST00000606857 840 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 AC096772.1-201ENST00000609146 564 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 U1.23-201ENST00000610293 146 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 RNU1-68P-201ENST00000615382 146 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.91□□□□□ -1.94
NPAS1Q99742 U1.39-201ENST00000621562 146 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 AC002064.3-201ENST00000623448 346 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 MTND5P19-201ENST00000424872 1794 ntBASIC2.91□□□□□ -1.94
NPAS1Q99742 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
NPAS1Q99742 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
NPAS1Q99742 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
NPAS1Q99742 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
NPAS1Q99742 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
NPAS1Q99742 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
NPAS1Q99742 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
NPAS1Q99742 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.9□□□□□ -1.95
NPAS1Q99742 Y_RNA.2-201ENST00000362330 96 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 RNU6-593P-201ENST00000364716 112 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 Y_RNA.473-201ENST00000384333 102 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 SNORA26.7-201ENST00000391288 122 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 MTCYBP4-201ENST00000401524 249 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 RNU6-1050P-201ENST00000410388 107 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 RNU4-14P-201ENST00000410858 122 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.9□□□□□ -1.95
NPAS1Q99742 RPL23AP50-201ENST00000434149 455 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 RPL30P15-201ENST00000457129 321 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 Y_RNA.632-201ENST00000459189 102 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 RPL30P12-201ENST00000474666 353 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 Y_RNA.708-201ENST00000516950 96 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.9□□□□□ -1.95
NPAS1Q99742 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.9□□□□□ -1.95
NPAS1Q99742 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.9□□□□□ -1.95
NPAS1Q99742 IMMP1LP2-201ENST00000552954 492 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.9□□□□□ -1.95
NPAS1Q99742 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
NPAS1Q99742 AC074050.1-201ENST00000563247 211 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.9□□□□□ -1.95
NPAS1Q99742 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.9□□□□□ -1.95
NPAS1Q99742 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.9□□□□□ -1.95
NPAS1Q99742 BNIP3P16-201ENST00000589779 534 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.9□□□□□ -1.95
NPAS1Q99742 AL391813.1-201ENST00000603098 260 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 uc_338.25-201ENST00000613756 156 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 AL157817.1-201ENST00000614264 790 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 AC084781.2-201ENST00000615568 161 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 AL359314.1-201ENST00000616913 261 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 MTND4LP32-201ENST00000636111 270 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 AC241585.2-209ENST00000638217 143 ntBASIC2.9□□□□□ -1.95
NPAS1Q99742 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NPAS1Q99742 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
NPAS1Q99742 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.9□□□□□ -1.95
NPAS1Q99742 MTND5P1-201ENST00000445440 1375 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NPAS1Q99742 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.89□□□□□ -1.95
NPAS1Q99742 MIR887-201ENST00000401258 79 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 RN7SKP58-201ENST00000411010 305 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.89□□□□□ -1.95
NPAS1Q99742 BMS1P22-201ENST00000414726 313 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 USP9YP30-201ENST00000430729 455 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 Z98742.2-201ENST00000431564 187 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 AC236972.1-201ENST00000433225 199 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 AC115115.1-201ENST00000449927 248 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NPAS1Q99742 AP001324.2-201ENST00000461163 319 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 SNORA31.23-201ENST00000517219 133 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAS1Q99742 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAS1Q99742 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.89□□□□□ -1.95
NPAS1Q99742 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.89□□□□□ -1.95
NPAS1Q99742 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.89□□□□□ -1.95
NPAS1Q99742 YPEL5P2-201ENST00000605553 359 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.89□□□□□ -1.95
NPAS1Q99742 AL442067.2-201ENST00000614033 363 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 AC138627.2-201ENST00000624202 601 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 AC091903.1-201ENST00000624322 454 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 MIR3651-201ENST00000630427 90 ntBASIC2.89□□□□□ -1.95
NPAS1Q99742 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NPAS1Q99742 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NPAS1Q99742 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAS1Q99742 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.88□□□□□ -1.95
NPAS1Q99742 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
NPAS1Q99742 AC091564.4-201ENST00000533934 2194 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms