Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AC087241.4-201ENST00000612441 480 ntBASIC2.02□□□□□ -2.09
VPS35Q96QK1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.02□□□□□ -2.09
VPS35Q96QK1 RMST_7.1-201ENST00000621935 268 ntBASIC2.02□□□□□ -2.09
VPS35Q96QK1 AC090517.3-201ENST00000625170 141 ntBASIC2.02□□□□□ -2.09
VPS35Q96QK1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS35Q96QK1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS35Q96QK1 AL354685.2-201ENST00000448218 1447 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 SNORD56.1-201ENST00000362913 68 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 RNU6-529P-201ENST00000363383 104 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 RNU6-45P-201ENST00000384471 107 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 MIR17-201ENST00000385012 84 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 RNU2-3P-201ENST00000410144 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 RNA5SP390-201ENST00000410191 113 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 RNU2-2P-201ENST00000410396 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS35Q96QK1 BX295541.1-201ENST00000417774 250 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 OOSP1P1-201ENST00000423265 274 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS35Q96QK1 USP9YP8-201ENST00000441913 500 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 MTND2P4-201ENST00000445034 1004 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 RNU7-182P-201ENST00000459009 62 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 AC025033.1-201ENST00000463883 194 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 AC055731.1-201ENST00000474387 401 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.01□□□□□ -2.09
VPS35Q96QK1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS35Q96QK1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS35Q96QK1 RNA5SP137-201ENST00000516833 135 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS35Q96QK1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS35Q96QK1 MIR4775-201ENST00000581168 75 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 AL031274.2-201ENST00000599419 203 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 Z84480.1-201ENST00000605131 311 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 U2.15-201ENST00000611544 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 U2.16-201ENST00000613119 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 U2.12-201ENST00000613778 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 U2.20-201ENST00000613956 192 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 U2.9-201ENST00000615427 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 U2.11-201ENST00000616345 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 U2.2-201ENST00000616535 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 U2.3-201ENST00000617785 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 U2.19-201ENST00000618602 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 RNU2-1-201ENST00000618664 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 U2.6-201ENST00000619225 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 U2.5-201ENST00000619465 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 U2.10-201ENST00000620268 191 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 AC091932.3-201ENST00000624223 323 ntBASIC2.01□□□□□ -2.09
VPS35Q96QK1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS35Q96QK1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2□□□□□ -2.09
VPS35Q96QK1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2□□□□□ -2.09
VPS35Q96QK1 RNU6-1210P-201ENST00000363775 107 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 RNU5E-7P-201ENST00000365290 117 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 RNU6-282P-201ENST00000365357 103 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 RNU6-1274P-201ENST00000384557 107 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2□□□□□ -2.09
VPS35Q96QK1 CYCSP33-201ENST00000414485 327 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 AC133104.1-201ENST00000429100 218 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2□□□□□ -2.09
VPS35Q96QK1 AC244505.5-201ENST00000443639 207 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 RPS29P15-201ENST00000458329 171 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 snoU13.14-201ENST00000459372 104 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 AC107032.1-201ENST00000485945 480 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 AC092436.1-201ENST00000506450 503 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2□□□□□ -2.09
VPS35Q96QK1 AC074344.1-201ENST00000512823 224 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2□□□□□ -2.09
VPS35Q96QK1 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 RNA5SP503-201ENST00000517047 117 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 RNU2-19P-201ENST00000517288 84 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2□□□□□ -2.09
VPS35Q96QK1 AC107953.1-201ENST00000522216 297 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2□□□□□ -2.09
VPS35Q96QK1 MIR4529-201ENST00000578110 78 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 AC007229.1-201ENST00000590455 412 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 AC008749.1-201ENST00000597650 306 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 ELOCP5-201ENST00000604924 333 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 AL670379.2-201ENST00000604983 252 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 AC005858.4-201ENST00000623191 700 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 SEPT14P19-203ENST00000633205 211 ntBASIC2□□□□□ -2.09
VPS35Q96QK1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS35Q96QK1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2□□□□□ -2.09
VPS35Q96QK1 RNU6-715P-201ENST00000365204 103 ntBASIC1.99□□□□□ -2.09
VPS35Q96QK1 RNU6-1029P-201ENST00000384109 107 ntBASIC1.99□□□□□ -2.09
VPS35Q96QK1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.99□□□□□ -2.09
VPS35Q96QK1 RNU4-26P-201ENST00000410270 107 ntBASIC1.99□□□□□ -2.09
VPS35Q96QK1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.99□□□□□ -2.09
VPS35Q96QK1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.99□□□□□ -2.09
VPS35Q96QK1 AL596276.1-201ENST00000434465 418 ntBASIC1.99□□□□□ -2.09
VPS35Q96QK1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.99□□□□□ -2.09
VPS35Q96QK1 RPL23AP7-203ENST00000449021 469 ntBASIC1.99□□□□□ -2.09
VPS35Q96QK1 AC079448.1-201ENST00000449377 373 ntBASIC1.99□□□□□ -2.09
VPS35Q96QK1 AL021397.1-201ENST00000451806 248 ntBASIC1.99□□□□□ -2.09
VPS35Q96QK1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS35Q96QK1 MTCYBP40-201ENST00000509390 1135 ntBASIC1.99□□□□□ -2.09
VPS35Q96QK1 AC104136.1-201ENST00000512969 394 ntBASIC1.99□□□□□ -2.09
VPS35Q96QK1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS35Q96QK1 RNU6-1178P-201ENST00000516674 107 ntBASIC1.99□□□□□ -2.09
VPS35Q96QK1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms