Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC002553.4-201ENST00000616896 331 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.59□□□□□ -1.99
CMTM3Q96MX0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.59□□□□□ -1.99
CMTM3Q96MX0 AC241585.2-209ENST00000638217 143 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 RNU6-212P-201ENST00000362642 104 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 RNU6-254P-201ENST00000363377 107 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 SNORD113-7-201ENST00000363762 77 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 RNU6-1210P-201ENST00000363775 107 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 RNU6-1329P-201ENST00000365664 107 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 RNU6-214P-201ENST00000384130 107 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 SNORA7.4-201ENST00000384249 137 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 RNU6-692P-201ENST00000384496 107 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 Y_RNA.530-201ENST00000384587 101 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 MIR592-201ENST00000384959 97 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
CMTM3Q96MX0 AL445529.1-201ENST00000398713 389 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 RNU2-63P-201ENST00000410792 194 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.58□□□□□ -2
CMTM3Q96MX0 AIMP1P2-201ENST00000425294 312 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 AC011753.1-201ENST00000451001 220 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 AC007547.1-201ENST00000462177 490 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.58□□□□□ -2
CMTM3Q96MX0 AL121594.1-201ENST00000475906 575 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 RPS29P2-201ENST00000479278 136 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 AF213884.2-201ENST00000510417 903 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.58□□□□□ -2
CMTM3Q96MX0 SRGNP1-201ENST00000603392 451 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 AL713866.2-201ENST00000603579 219 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 AL138963.2-201ENST00000605137 226 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CMTM3Q96MX0 HMGB1P24-202ENST00000615653 685 ntBASIC2.58□□□□□ -2
CMTM3Q96MX0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.58□□□□□ -2
CMTM3Q96MX0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CMTM3Q96MX0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.58□□□□□ -2
CMTM3Q96MX0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CMTM3Q96MX0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.57□□□□□ -2
CMTM3Q96MX0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.57□□□□□ -2
CMTM3Q96MX0 Y_RNA.157-201ENST00000363638 102 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 MIR7-3-201ENST00000384898 110 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 U3.19-201ENST00000390893 196 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 CBX3P9-201ENST00000402326 552 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 AC236972.1-201ENST00000433225 199 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 FGF7P6-202ENST00000451282 293 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 CYP2C59P-201ENST00000457790 269 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 RPL30P1-201ENST00000488676 339 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 MTCYBP18-201ENST00000501056 747 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 FAM206BP-201ENST00000510179 541 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 ELOCP31-201ENST00000540463 467 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 AC107016.2-201ENST00000547968 190 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 AC100830.2-201ENST00000581636 240 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 AL356157.2-201ENST00000605122 111 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 CTHRC1P1-201ENST00000605383 469 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 AC064836.2-201ENST00000609491 462 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 AL355365.1-201ENST00000616480 294 ntBASIC2.57□□□□□ -2
CMTM3Q96MX0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.56□□□□□ -2
CMTM3Q96MX0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.56□□□□□ -2
CMTM3Q96MX0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.56□□□□□ -2
CMTM3Q96MX0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CMTM3Q96MX0 RNU6-1285P-201ENST00000363480 105 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 RNA5SP240-201ENST00000365355 128 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 MIR449B-201ENST00000384995 97 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 ZNF885P-201ENST00000420174 1098 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 SNAP23P1-201ENST00000433229 246 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.56□□□□□ -2
CMTM3Q96MX0 USP9YP8-201ENST00000441913 500 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.56□□□□□ -2
CMTM3Q96MX0 SNORA84-201ENST00000459229 133 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 FTH1P2-201ENST00000466086 412 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 CKS1BP2-201ENST00000497342 240 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 TRBVA-201ENST00000498804 316 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 AC008628.2-201ENST00000502605 298 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.56□□□□□ -2
CMTM3Q96MX0 AC092436.3-201ENST00000511788 257 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.56□□□□□ -2
CMTM3Q96MX0 RNU6-1332P-201ENST00000516666 104 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 RNA5SP82-201ENST00000516707 92 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.56□□□□□ -2
CMTM3Q96MX0 AC115990.1-201ENST00000526957 301 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 AC104237.2-201ENST00000612456 443 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 AC006133.1-201ENST00000617106 264 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.56□□□□□ -2
CMTM3Q96MX0 AC007318.2-201ENST00000620999 243 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 AC039056.2-201ENST00000622261 511 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 AC012442.3-202ENST00000636742 206 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.56□□□□□ -2
CMTM3Q96MX0 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
CMTM3Q96MX0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.56□□□□□ -2
CMTM3Q96MX0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.56□□□□□ -2
CMTM3Q96MX0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.55□□□□□ -2
CMTM3Q96MX0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.55□□□□□ -2
CMTM3Q96MX0 RNU6-1141P-201ENST00000364520 107 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 RNU6-128P-201ENST00000383976 107 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 RNU6-43P-201ENST00000384302 107 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 MIR95-201ENST00000385072 81 ntBASIC2.55□□□□□ -2
CMTM3Q96MX0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.55□□□□□ -2
CMTM3Q96MX0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.55□□□□□ -2
CMTM3Q96MX0 UBE2V1P4-201ENST00000425374 344 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms