Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.84□□□□□ -2.12
USP47Q96K76 AP003122.4-201ENST00000530980 758 ntBASIC1.84□□□□□ -2.12
USP47Q96K76 AC091489.2-201ENST00000566263 604 ntBASIC1.84□□□□□ -2.12
USP47Q96K76 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.84□□□□□ -2.12
USP47Q96K76 AC008121.3-201ENST00000618726 433 ntBASIC1.84□□□□□ -2.12
USP47Q96K76 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.84□□□□□ -2.12
USP47Q96K76 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.83□□□□□ -2.12
USP47Q96K76 AP000560.1-201ENST00000624150 1937 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 RBBP8P1-201ENST00000449447 1844 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 SNORD56.2-201ENST00000363242 71 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 MIR758-201ENST00000390227 88 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 AC114491.1-201ENST00000416095 246 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 AC012308.1-201ENST00000451232 178 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 RNA5SP233-201ENST00000459153 113 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 RNU7-51P-201ENST00000516560 62 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 RNA5SP337-201ENST00000517007 109 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.83□□□□□ -2.12
USP47Q96K76 ELOCP32-201ENST00000548625 324 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 MIR3908-201ENST00000579798 126 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.83□□□□□ -2.12
USP47Q96K76 AC008749.1-201ENST00000597650 306 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 AL031274.2-201ENST00000599419 203 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 AC105129.3-201ENST00000605455 485 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 AC093788.1-201ENST00000609356 927 ntBASIC1.83□□□□□ -2.12
USP47Q96K76 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.83□□□□□ -2.12
USP47Q96K76 ZNF702P-202ENST00000434269 1966 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 MIR96-201ENST00000362288 78 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 RNA5SP276-201ENST00000362580 94 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 RNU1-23P-201ENST00000363361 144 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 U3.13-201ENST00000364804 214 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 SNORD115.1-201ENST00000391109 76 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USP47Q96K76 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USP47Q96K76 HMGN2P39-201ENST00000398005 273 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 AC098592.1-201ENST00000419352 333 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 AC008267.5-201ENST00000424928 265 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.82□□□□□ -2.12
USP47Q96K76 MTND1P12-201ENST00000455231 147 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 PMCHL2-203ENST00000457791 237 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 AC018868.1-201ENST00000491307 315 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 RNA5SP137-201ENST00000516833 135 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 SNORA48.11-201ENST00000517015 89 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 AC011604.1-201ENST00000545978 196 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.82□□□□□ -2.12
USP47Q96K76 AC136619.2-201ENST00000563361 631 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 AP002360.4-201ENST00000606980 481 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 AC007671.2-201ENST00000637344 619 ntBASIC1.82□□□□□ -2.12
USP47Q96K76 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.82□□□□□ -2.12
USP47Q96K76 MTCYBP36-201ENST00000404146 440 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 Y_RNA.623-201ENST00000411128 95 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.81□□□□□ -2.12
USP47Q96K76 AC096920.1-201ENST00000423991 241 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 MTCYBP39-201ENST00000437562 491 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 AL606517.1-201ENST00000446914 387 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 AL590365.1-201ENST00000450788 243 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
USP47Q96K76 MED28P2-201ENST00000475771 317 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 AP000797.1-201ENST00000478870 387 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.81□□□□□ -2.12
USP47Q96K76 AC020699.1-201ENST00000505161 445 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 AC092436.3-201ENST00000511788 257 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 AP003181.2-201ENST00000528941 181 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.81□□□□□ -2.12
USP47Q96K76 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.81□□□□□ -2.12
USP47Q96K76 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.81□□□□□ -2.12
USP47Q96K76 MIR4287-201ENST00000579398 78 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 ELOCP5-201ENST00000604924 333 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 AL359547.2-201ENST00000615810 418 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 AC022960.3-201ENST00000619794 441 ntBASIC1.81□□□□□ -2.12
USP47Q96K76 AC073343.1-201ENST00000328239 651 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 RNU6-942P-201ENST00000363002 107 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 RNU1-22P-201ENST00000363334 158 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 RNU6-843P-201ENST00000384454 104 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 UBE2V1P10-201ENST00000414685 269 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 AL365184.2-201ENST00000431139 435 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.8□□□□□ -2.12
USP47Q96K76 AC010587.1-201ENST00000505809 469 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.8□□□□□ -2.12
USP47Q96K76 RNU2-53P-201ENST00000516257 147 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 AC034114.1-201ENST00000520293 285 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 AP003461.1-201ENST00000528866 78 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.8□□□□□ -2.12
USP47Q96K76 AC084364.2-201ENST00000546924 395 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 AC008015.1-201ENST00000555505 465 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 PCMTD1P2-201ENST00000565017 355 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.8□□□□□ -2.12
USP47Q96K76 AC078899.2-201ENST00000595282 212 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 BNIP3P39-201ENST00000601077 554 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 DEFB131E-202ENST00000602581 683 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 AC073410.2-201ENST00000603240 332 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 AL022154.1-201ENST00000604698 785 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 U6.42-201ENST00000618440 107 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 AL133216.2-202ENST00000634512 349 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.8□□□□□ -2.12
USP47Q96K76 MIR3529-201ENST00000637713 78 ntBASIC1.8□□□□□ -2.12
USP47Q96K76 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.79□□□□□ -2.12
USP47Q96K76 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms