Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC124916.1-201ENST00000444020 547 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 GSTA11P-201ENST00000452866 669 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 RN7SL636P-201ENST00000497504 294 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 RPL37P25-201ENST00000507308 276 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 MTCO3P13-201ENST00000577757 781 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 AC090897.2-201ENST00000581715 130 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 AC008752.3-201ENST00000588113 712 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 AC012507.3-201ENST00000603556 477 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 AC009233.1-201ENST00000616477 371 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-37P-201ENST00000362692 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-11P-201ENST00000364234 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-1303P-201ENST00000364841 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-25P-201ENST00000383873 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-1-201ENST00000383898 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-48P-201ENST00000384161 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-36P-201ENST00000384172 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-4P-201ENST00000384205 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-5P-201ENST00000384238 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-622P-201ENST00000384272 103 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-3P-201ENST00000384314 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-16P-201ENST00000384385 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-15P-201ENST00000384534 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-2-201ENST00000384627 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-29P-201ENST00000384637 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 SNORD116-4-201ENST00000384733 96 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-9-201ENST00000384776 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-33P-201ENST00000384793 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AL590004.2-201ENST00000404787 371 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RN7SKP223-201ENST00000410582 62 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU4-55P-201ENST00000410731 137 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 CYCSP33-201ENST00000414485 327 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 DLGAP5P1-201ENST00000430307 464 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AC011816.1-201ENST00000441346 546 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AC009238.1-201ENST00000442165 424 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AC009237.6-201ENST00000446969 424 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RPL30P12-201ENST00000474666 353 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RPS27AP9-201ENST00000477681 438 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-377P-201ENST00000515965 102 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-586P-201ENST00000517265 104 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AL138976.2-201ENST00000563989 694 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 MTATP6P3-201ENST00000581686 676 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RNU6-6P-201ENST00000606623 107 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AP001596.2-201ENST00000608410 312 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 AL354950.2-201ENST00000617939 290 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 RMST_7.1-201ENST00000621935 268 ntBASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.29□□□□□ -2.04
SNRNP40Q96DI7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 RNU6-552P-201ENST00000362869 119 ntBASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 RNU6-996P-201ENST00000365438 107 ntBASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 MIR561-201ENST00000385216 97 ntBASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 RNU2-23P-201ENST00000410545 195 ntBASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 RPL39P40-201ENST00000445481 146 ntBASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 TPTE2P5-203ENST00000458118 728 ntBASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 MTCO3P9-201ENST00000506989 781 ntBASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 AC069113.1-201ENST00000517763 267 ntBASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 MIR3126-201ENST00000577443 74 ntBASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 SNORD14A-201ENST00000606526 91 ntBASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 U2.17-201ENST00000611454 95 ntBASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 Z69720.2-201ENST00000624755 279 ntBASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 AC002543.1-201ENST00000299783 1954 ntBASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SNRNP40Q96DI7 RNU6-1032P-201ENST00000384100 107 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 RNU6-1127P-201ENST00000384580 107 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 SNORD37.1-201ENST00000390968 65 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AC068050.1-201ENST00000394891 380 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 BTF3P7-201ENST00000407097 488 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 DPH3P2-201ENST00000422618 250 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 MTCYBP8-201ENST00000422855 651 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AC008267.5-201ENST00000424928 265 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AC027673.1-201ENST00000456245 405 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 snoU13.23-201ENST00000458863 104 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 AP001025.1-201ENST00000486139 332 ntBASIC2.27□□□□□ -2.05
SNRNP40Q96DI7 RNU2-69P-201ENST00000516061 100 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms