Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU6-198P-201ENST00000384258 104 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 BTF3L4P2-201ENST00000392798 346 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 RNA5SP229-201ENST00000410809 99 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 EIF4EP2-201ENST00000422816 654 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 MTND3P9-201ENST00000429526 346 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 HMGN2P20-201ENST00000437531 273 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 CYCSP32-201ENST00000440548 321 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 HMGN2P13-201ENST00000476476 274 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 RPL17P19-201ENST00000489069 552 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 AC010265.1-201ENST00000513509 211 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 SNORA31.18-201ENST00000517043 134 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 RNU6-699P-201ENST00000517081 110 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 MIR4276-201ENST00000584832 70 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 HMGN2P15-201ENST00000585707 270 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 AL360085.1-201ENST00000604713 532 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 AL355802.3-201ENST00000607571 545 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 uc_338.1-201ENST00000612113 180 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 RNU6-942P-201ENST00000363002 107 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 SNORD116-20-201ENST00000384529 92 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 RNU6-1160P-201ENST00000384546 104 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 RNU6-1077P-201ENST00000410506 102 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 AC005300.1-201ENST00000428401 373 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 AC099799.1-201ENST00000439809 192 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 AL714022.1-201ENST00000439897 151 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 AC006539.3-201ENST00000454258 129 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 RNU7-23P-201ENST00000459465 62 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 RPL21P10-201ENST00000463521 490 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 RN7SL601P-201ENST00000471221 293 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 FO393415.2-201ENST00000480085 343 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 SNORA25.10-201ENST00000515926 124 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 SNORA31.1-201ENST00000515993 133 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 SNORA31.5-201ENST00000516190 133 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 SUB1P3-201ENST00000564581 315 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 MIR4474-201ENST00000579189 78 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 AC073657.2-201ENST00000605661 303 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 AC024581.2-201ENST00000619986 252 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 AC138627.2-201ENST00000624202 601 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 MTND5P1-201ENST00000445440 1375 ntBASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTHRC1Q96CG8 SNORA48.8-201ENST00000391324 134 ntBASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 NUP35P1-201ENST00000422734 947 ntBASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 MTND2P23-201ENST00000422990 651 ntBASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 AC005326.1-201ENST00000429197 123 ntBASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 MRPL42P6-201ENST00000486397 371 ntBASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 MTND5P9-201ENST00000503854 1755 ntBASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 AC022447.4-201ENST00000504053 364 ntBASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 RNU6-581P-201ENST00000516214 105 ntBASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 CBX3P8-201ENST00000532412 525 ntBASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 AC004944.1-201ENST00000517807 3059 ntBASIC3.06□□□□□ -1.92
CTHRC1Q96CG8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 AC233263.6-201ENST00000631132 1963 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 Y_RNA.48-201ENST00000362710 103 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 RNY1P16-201ENST00000363063 111 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 Y_RNA.333-201ENST00000365274 102 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 RNU6-738P-201ENST00000384531 106 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 FTH1P15-201ENST00000406984 280 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 RNA5SP120-201ENST00000410900 112 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 AC074117.2-201ENST00000417130 397 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 AC243428.1-201ENST00000421099 264 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 AC008267.5-201ENST00000424928 265 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms