Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.19□□□□□ -1.9
ATP2A3Q93084 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.19□□□□□ -1.9
ATP2A3Q93084 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.19□□□□□ -1.9
ATP2A3Q93084 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATP2A3Q93084 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.19□□□□□ -1.9
ATP2A3Q93084 RPL23AP94-201ENST00000512518 302 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 RNU6-1069P-201ENST00000516612 133 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 RNU6-256P-201ENST00000516747 97 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 SNORA31.19-201ENST00000517079 126 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 Y_RNA.718-201ENST00000517110 102 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 SNORA25.17-201ENST00000517184 124 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 SNORA31.26-201ENST00000517250 137 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.19□□□□□ -1.9
ATP2A3Q93084 RNU6-323P-201ENST00000521915 107 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 AP005639.2-201ENST00000527592 928 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.19□□□□□ -1.9
ATP2A3Q93084 AP000889.2-201ENST00000532684 490 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 AL442663.2-201ENST00000554385 511 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 MIR5692C1-201ENST00000585309 91 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 AL355598.1-201ENST00000604169 202 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 AL162730.1-201ENST00000605734 292 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 MTND5P7-201ENST00000413558 1798 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.19□□□□□ -1.9
ATP2A3Q93084 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.19□□□□□ -1.9
ATP2A3Q93084 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
ATP2A3Q93084 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
ATP2A3Q93084 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ATP2A3Q93084 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.18□□□□□ -1.9
ATP2A3Q93084 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ATP2A3Q93084 MIR22-201ENST00000362190 85 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 SNORA63C-201ENST00000364578 129 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 SNORA51.4-201ENST00000364993 124 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 Y_RNA.384-201ENST00000383909 102 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 SNORA75B-201ENST00000384053 137 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 Y_RNA.431-201ENST00000384086 102 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 MIR548P-201ENST00000408336 84 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 MIR548K-201ENST00000408406 116 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 VN1R36P-201ENST00000414936 291 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.18□□□□□ -1.9
ATP2A3Q93084 AL513477.1-202ENST00000417061 214 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 TOMM20P4-201ENST00000427861 435 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 AC244505.4-201ENST00000434905 287 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.18□□□□□ -1.9
ATP2A3Q93084 SSXP5-201ENST00000443473 287 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 NDUFB1P2-201ENST00000449477 176 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 NIPA2P5-201ENST00000452282 464 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 AL583843.1-201ENST00000456070 346 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 Y_RNA.639-201ENST00000458981 102 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 RN7SL75P-201ENST00000461926 281 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 AC117503.1-201ENST00000472241 394 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 RPL31P41-201ENST00000477967 372 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 MRPS36P2-201ENST00000512569 299 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 RNU6-327P-201ENST00000516270 127 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 RNU6-572P-201ENST00000516724 80 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 AC087854.1-201ENST00000519706 414 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 COPS8P3-201ENST00000526024 482 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 APOOP3-201ENST00000536787 586 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.18□□□□□ -1.9
ATP2A3Q93084 AC025281.1-201ENST00000567026 265 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 MIR3672-201ENST00000584290 82 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.18□□□□□ -1.9
ATP2A3Q93084 SNRPGP17-201ENST00000603780 214 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 AL645944.1-201ENST00000603857 493 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 AC007938.3-201ENST00000604965 623 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 AC116312.1-201ENST00000606841 314 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 AC040896.1-201ENST00000613819 479 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 RMST_4.1-201ENST00000616886 107 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 U6.99-201ENST00000637524 83 ntBASIC3.18□□□□□ -1.9
ATP2A3Q93084 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
ATP2A3Q93084 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.18□□□□□ -1.9
ATP2A3Q93084 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.18□□□□□ -1.9
ATP2A3Q93084 AC108206.1-201ENST00000570186 4159 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATP2A3Q93084 SNORD3E-201ENST00000362899 217 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 SNORA5B-201ENST00000363786 132 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 RNY4P36-201ENST00000391116 96 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 SNORA40C-201ENST00000391285 128 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 Y_RNA.623-201ENST00000411128 95 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 BMS1P22-201ENST00000414726 313 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 SKA2P1-201ENST00000425592 390 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 AC098614.2-201ENST00000426040 255 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 Z82205.1-201ENST00000428456 297 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.17□□□□□ -1.9
ATP2A3Q93084 AL627311.1-201ENST00000431514 115 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 RPS15AP5-201ENST00000436276 388 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 AL078601.1-201ENST00000444542 271 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 Z96811.1-201ENST00000445880 108 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 MTND4P19-201ENST00000446659 478 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 AC087884.1-201ENST00000469738 328 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 UBE2DNL-203ENST00000474922 222 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 AC027575.1-201ENST00000481064 460 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 AC011005.2-201ENST00000487324 359 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 RNU1-86P-201ENST00000516108 154 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 RNU1-107P-201ENST00000516617 154 ntBASIC3.17□□□□□ -1.9
ATP2A3Q93084 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.17□□□□□ -1.9
ATP2A3Q93084 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms