Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.86□□□□□ -1.79
RTF1Q92541 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.86□□□□□ -1.79
RTF1Q92541 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RTF1Q92541 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.86□□□□□ -1.79
RTF1Q92541 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.86□□□□□ -1.79
RTF1Q92541 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.86□□□□□ -1.79
RTF1Q92541 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.86□□□□□ -1.79
RTF1Q92541 AL162730.1-201ENST00000605734 292 ntBASIC3.86□□□□□ -1.79
RTF1Q92541 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RTF1Q92541 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.86□□□□□ -1.79
RTF1Q92541 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RTF1Q92541 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RTF1Q92541 Y_RNA.28-201ENST00000362554 111 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 RNU6-890P-201ENST00000384121 107 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 RNU6-217P-201ENST00000384164 104 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 MIR517A-201ENST00000385001 87 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 MIR10A-201ENST00000385043 110 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 MIR34A-201ENST00000385130 110 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 MIR325-201ENST00000385260 98 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 RNU6-1106P-201ENST00000390845 107 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 AL030996.1-201ENST00000411430 235 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 AC098614.2-201ENST00000426040 255 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 TOMM20P4-201ENST00000427861 435 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 HMGB1P12-201ENST00000438594 598 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 DAP3P1-201ENST00000441522 278 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 AL078601.1-201ENST00000444542 271 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 PCMTD1P1-201ENST00000455560 355 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 AC092798.1-201ENST00000458542 409 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 AL135752.1-201ENST00000479477 471 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 RPL7P42-201ENST00000481005 679 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.85□□□□□ -1.79
RTF1Q92541 RNU6-572P-201ENST00000516724 80 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 RNU6-307P-201ENST00000516743 106 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 CASP1P1-201ENST00000526345 212 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 AC005899.2-201ENST00000584353 90 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 AC016925.2-201ENST00000605108 242 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.85□□□□□ -1.79
RTF1Q92541 AC040896.1-201ENST00000613819 479 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 AL110115.1-201ENST00000614396 364 ntBASIC3.85□□□□□ -1.79
RTF1Q92541 Y_RNA.31-201ENST00000362574 102 ntBASIC3.84□□□□□ -1.79
RTF1Q92541 Y_RNA.151-201ENST00000363566 112 ntBASIC3.84□□□□□ -1.79
RTF1Q92541 SNORA63C-201ENST00000364578 129 ntBASIC3.84□□□□□ -1.79
RTF1Q92541 SNORA9.2-201ENST00000365361 133 ntBASIC3.84□□□□□ -1.79
RTF1Q92541 SNORA22B-201ENST00000383876 138 ntBASIC3.84□□□□□ -1.79
RTF1Q92541 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.84□□□□□ -1.79
RTF1Q92541 SNORD56-201ENST00000413522 71 ntBASIC3.84□□□□□ -1.79
RTF1Q92541 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.84□□□□□ -1.79
RTF1Q92541 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.84□□□□□ -1.79
RTF1Q92541 AC007560.1-201ENST00000426912 237 ntBASIC3.84□□□□□ -1.79
RTF1Q92541 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.84□□□□□ -1.79
RTF1Q92541 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.84□□□□□ -1.79
RTF1Q92541 RNU6-988P-201ENST00000519081 107 ntBASIC3.84□□□□□ -1.79
RTF1Q92541 AC068657.1-201ENST00000520807 306 ntBASIC3.84□□□□□ -1.79
RTF1Q92541 FTX_3.1-201ENST00000610451 147 ntBASIC3.84□□□□□ -1.79
RTF1Q92541 AC011890.2-201ENST00000613393 294 ntBASIC3.84□□□□□ -1.79
RTF1Q92541 AC092608.2-201ENST00000624427 218 ntBASIC3.84□□□□□ -1.79
RTF1Q92541 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.84□□□□□ -1.8
RTF1Q92541 AL035425.3-201ENST00000564206 4996 ntBASIC3.84□□□□□ -1.8
RTF1Q92541 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RTF1Q92541 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
RTF1Q92541 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTF1Q92541 Y_RNA.5-201ENST00000362334 102 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-37P-201ENST00000362692 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 SNORA5B-201ENST00000363786 132 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-11P-201ENST00000364234 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-596P-201ENST00000365395 98 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-25P-201ENST00000383873 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-1-201ENST00000383898 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-48P-201ENST00000384161 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-36P-201ENST00000384172 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-4P-201ENST00000384205 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-5P-201ENST00000384238 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-3P-201ENST00000384314 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 Y_RNA.473-201ENST00000384333 102 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-16P-201ENST00000384385 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-15P-201ENST00000384534 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-2-201ENST00000384627 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-29P-201ENST00000384637 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-9-201ENST00000384776 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-33P-201ENST00000384793 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RTF1Q92541 SNORA48.8-201ENST00000391324 134 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 AC018865.2-201ENST00000423631 129 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 AL135938.1-201ENST00000443141 297 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 AL035666.1-201ENST00000446195 348 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 MIR2053-201ENST00000459295 91 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-1037P-201ENST00000459571 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 AC018437.1-201ENST00000492214 406 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 AC113155.1-201ENST00000511141 769 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-703P-201ENST00000516946 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 SYF2P1-201ENST00000550658 413 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 AL355598.1-201ENST00000604169 202 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 RNU6-6P-201ENST00000606623 107 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 AC116312.1-201ENST00000606841 314 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 AC027309.3-201ENST00000623419 351 ntBASIC3.83□□□□□ -1.8
RTF1Q92541 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTF1Q92541 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTF1Q92541 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RTF1Q92541 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RTF1Q92541 FTLP6-201ENST00000355274 422 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms