Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SNORA50A-202ENST00000629536 136 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 MIR3529-201ENST00000637713 78 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGB4Q8WW32 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.03□□□□□ -1.93
HMGB4Q8WW32 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGB4Q8WW32 RNU6-301P-201ENST00000384277 107 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 RNU6-843P-201ENST00000384454 104 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 RNU6-1106P-201ENST00000390845 107 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 RPS29P13-201ENST00000402041 169 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
HMGB4Q8WW32 AC074117.2-201ENST00000417130 397 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 RPS15AP10-201ENST00000432472 382 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.02□□□□□ -1.93
HMGB4Q8WW32 AC004383.1-201ENST00000438135 289 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 AC105272.1-201ENST00000438604 198 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 HMGN1P18-201ENST00000457642 277 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 AK3P2-201ENST00000507976 429 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 FGF7P4-201ENST00000509595 295 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGB4Q8WW32 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGB4Q8WW32 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGB4Q8WW32 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGB4Q8WW32 TRAV32-201ENST00000553993 340 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGB4Q8WW32 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGB4Q8WW32 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGB4Q8WW32 AP003122.5-201ENST00000527668 3766 ntBASIC3.02□□□□□ -1.93
HMGB4Q8WW32 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGB4Q8WW32 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGB4Q8WW32 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGB4Q8WW32 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGB4Q8WW32 AL136360.1-201ENST00000503377 1900 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 HAUS6P2-201ENST00000433254 2404 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HMGB4Q8WW32 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGB4Q8WW32 SAR1AP2-201ENST00000392696 594 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 MIR548F5-201ENST00000408421 86 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 AL358075.3-201ENST00000426289 226 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 TRIAP1P1-201ENST00000427062 225 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 OSTCP8-201ENST00000445117 448 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 RNU7-187P-201ENST00000458985 68 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 RN7SL429P-201ENST00000479090 223 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 RN7SL489P-201ENST00000486185 223 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 RN7SL327P-201ENST00000488659 223 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 RPL23AP49-201ENST00000492925 468 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 MTND4LP22-201ENST00000508209 276 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 RNU5F-8P-201ENST00000515941 111 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 RN7SKP132-201ENST00000516001 208 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 SNORA31.23-201ENST00000517219 133 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 RAB11AP2-201ENST00000545905 639 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGB4Q8WW32 RPS3AP23-202ENST00000574601 686 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 MIR4319-201ENST00000577285 85 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGB4Q8WW32 FGF7P1-201ENST00000582820 288 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 AC008739.2-201ENST00000597006 317 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 VN1R107P-201ENST00000601784 209 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 AC009314.1-201ENST00000603871 304 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGB4Q8WW32 AL132765.2-201ENST00000610812 351 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 AL591516.1-201ENST00000611326 274 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 RN7SL853P-201ENST00000617250 223 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 AC244517.12-201ENST00000623581 663 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 AC090617.7-201ENST00000623952 126 ntBASIC3.01□□□□□ -1.93
HMGB4Q8WW32 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGB4Q8WW32 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGB4Q8WW32 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3□□□□□ -1.93
HMGB4Q8WW32 RNU6-527P-201ENST00000363425 104 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 RNA5SP126-201ENST00000365092 109 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 Y_RNA.474-201ENST00000384341 102 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 Y_RNA.529-201ENST00000384586 119 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 EI24P2-201ENST00000397776 1076 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 RN7SKP158-201ENST00000410453 326 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 AL030996.1-201ENST00000411430 235 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 AC074085.1-201ENST00000413598 418 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3□□□□□ -1.93
HMGB4Q8WW32 RPS29P12-201ENST00000460178 152 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 AC133134.1-201ENST00000466800 359 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 AC107626.1-201ENST00000471084 183 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 AP001025.1-201ENST00000486139 332 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 GZMAP1-201ENST00000503054 631 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3□□□□□ -1.93
HMGB4Q8WW32 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3□□□□□ -1.93
HMGB4Q8WW32 MRPS36P2-201ENST00000512569 299 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 RNU5B-3P-201ENST00000516601 115 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 SNORA64.4-201ENST00000516632 81 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 AC010186.2-204ENST00000537668 439 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3□□□□□ -1.93
HMGB4Q8WW32 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3□□□□□ -1.93
HMGB4Q8WW32 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3□□□□□ -1.93
HMGB4Q8WW32 AL117336.2-201ENST00000602435 335 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 AC107294.3-201ENST00000609211 526 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 AC009233.1-201ENST00000616477 371 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3□□□□□ -1.93
HMGB4Q8WW32 AC099654.7-201ENST00000635788 2127 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 AC099654.5-201ENST00000636479 350 ntBASIC3□□□□□ -1.93
HMGB4Q8WW32 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3□□□□□ -1.93
HMGB4Q8WW32 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms