Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AL355816.2-201ENST00000610049 647 ntBASIC1.09□□□□□ -2.23
RPS4Y2Q8TD47 AL353770.2-201ENST00000620024 78 ntBASIC1.09□□□□□ -2.23
RPS4Y2Q8TD47 AC013437.2-201ENST00000639587 677 ntBASIC1.09□□□□□ -2.23
RPS4Y2Q8TD47 AP000560.1-201ENST00000624150 1937 ntBASIC1.09□□□□□ -2.24
RPS4Y2Q8TD47 MIR26B-201ENST00000362251 77 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 RNU4-92P-201ENST00000363783 136 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 MIR29B2-201ENST00000385055 81 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 RPL30P13-201ENST00000418873 348 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 AL008629.1-201ENST00000438615 184 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 CALM1P1-201ENST00000442082 433 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 AL353752.1-201ENST00000454946 260 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 MTCYBP40-201ENST00000509390 1135 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 RNU6-1003P-201ENST00000517099 105 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 AP003122.4-201ENST00000530980 758 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 AL359821.1-201ENST00000605519 182 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 AL050343.2-201ENST00000607338 280 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 AL159153.1-201ENST00000619688 317 ntBASIC1.08□□□□□ -2.24
RPS4Y2Q8TD47 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 SNORD3E-201ENST00000362899 217 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 SNORD14B-201ENST00000364533 90 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 RNU6-190P-201ENST00000384154 102 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 SNORA40.4-201ENST00000390971 128 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 MTND3P1-201ENST00000441336 220 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 AC012308.1-201ENST00000451232 178 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 AC112492.4-201ENST00000456549 352 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 RPL30P6-201ENST00000475925 342 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 AC093259.1-201ENST00000509755 300 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 Y_RNA.689-201ENST00000516589 107 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 RNU6-201P-201ENST00000517100 61 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 MIR4307-201ENST00000582802 84 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 AC069431.2-201ENST00000604149 1099 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 AC024940.5-201ENST00000622889 474 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 AL138960.2-201ENST00000625145 535 ntBASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RPS4Y2Q8TD47 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 MIR337-201ENST00000362281 93 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 SNORD116-20-201ENST00000384529 92 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AL353777.1-201ENST00000425552 326 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AL035666.1-201ENST00000446195 348 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 snoU109.2-201ENST00000459316 135 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AC112206.3-201ENST00000514578 389 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 RNVU1-2-201ENST00000516326 135 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 RNU2-10P-201ENST00000516375 211 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 RNU6-965P-201ENST00000516721 96 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AC123904.2-201ENST00000548059 300 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AL670379.2-201ENST00000604983 252 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AL670379.4-201ENST00000605279 254 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AL139022.2-201ENST00000606934 443 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 MIR1248-201ENST00000629190 106 ntBASIC1.06□□□□□ -2.24
RPS4Y2Q8TD47 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 RPS20P2-201ENST00000402520 389 ntBASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 Z82205.1-201ENST00000428456 297 ntBASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 CBX3P6-201ENST00000430257 527 ntBASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 RPS15AP10-201ENST00000432472 382 ntBASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 AC108078.2-201ENST00000510750 236 ntBASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 AC107934.1-201ENST00000522215 217 ntBASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.05□□□□□ -2.24
RPS4Y2Q8TD47 MIR3169-201ENST00000578032 83 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms