Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 MIR30A-201ENST00000385092 71 ntBASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 CBX3P9-201ENST00000402326 552 ntBASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 USP9YP18-201ENST00000425912 695 ntBASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 MTCO3P5-201ENST00000433620 714 ntBASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 RPL36AP21-201ENST00000490372 323 ntBASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 AC098862.1-201ENST00000504991 413 ntBASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 RN7SKP256-201ENST00000517201 314 ntBASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 AC084364.2-201ENST00000546924 395 ntBASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 AL158042.1-201ENST00000605338 460 ntBASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.08□□□□□ -2.24
CLDND2Q8NHS1 MIR412-201ENST00000362142 91 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 RNU6-212P-201ENST00000362642 104 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 Y_RNA.40-201ENST00000362645 93 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 Y_RNA.46-201ENST00000362695 102 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 RNY4P24-201ENST00000362735 96 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 RNU4-68P-201ENST00000364314 141 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 SNORD116-20-201ENST00000384529 92 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 RNU2-23P-201ENST00000410545 195 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 AL627311.1-201ENST00000431514 115 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 AP001025.1-201ENST00000486139 332 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 TPT1P8-201ENST00000510120 555 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 AC069431.2-201ENST00000604149 1099 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 AC108747.1-201ENST00000609508 535 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 AC004808.1-201ENST00000627671 721 ntBASIC1.07□□□□□ -2.24
CLDND2Q8NHS1 SNORD3E-201ENST00000362899 217 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 RNU6-960P-201ENST00000364056 120 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 RNU6-338P-201ENST00000383888 105 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 MIR10A-201ENST00000385043 110 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 MIR29B2-201ENST00000385055 81 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 MIR1276-201ENST00000408707 83 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 AC006366.1-201ENST00000422002 759 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 RPL23AP30-201ENST00000432419 501 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 CALM1P1-201ENST00000442082 433 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 PTENP1-201ENST00000447117 1215 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 RN7SKP179-201ENST00000516126 217 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 RNU2-10P-201ENST00000516375 211 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 MTATP6P15-201ENST00000527233 835 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 AC018630.3-201ENST00000542637 96 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 AC123904.2-201ENST00000548059 300 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 WISP1-OT1-201ENST00000602893 642 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 BNIP3P31-201ENST00000604515 566 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 AL022154.1-201ENST00000604698 785 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 AC021755.4-201ENST00000616620 456 ntBASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CLDND2Q8NHS1 ZNF680P1-201ENST00000436625 1469 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 snoU2_19.1-201ENST00000362361 80 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 SNORA48.1-201ENST00000390879 135 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 RNA5SP390-201ENST00000410191 113 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 RNU2-41P-201ENST00000410991 178 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 SDAD1P3-201ENST00000427380 333 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 AL008629.1-201ENST00000438615 184 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 AL353752.1-201ENST00000454946 260 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 snoU13.14-201ENST00000459372 104 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 RPL30P6-201ENST00000475925 342 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 RNA5SP102-201ENST00000516865 106 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 MIR4307-201ENST00000582802 84 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 AC010900.2-201ENST00000604508 210 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 AC144521.1-201ENST00000607148 956 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 AC097478.2-201ENST00000610572 514 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 MTND4P16-201ENST00000466108 1367 ntBASIC1.05□□□□□ -2.24
CLDND2Q8NHS1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CLDND2Q8NHS1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
CLDND2Q8NHS1 CBX3P1-201ENST00000325243 554 ntBASIC1.04□□□□□ -2.24
CLDND2Q8NHS1 RNU4-92P-201ENST00000363783 136 ntBASIC1.04□□□□□ -2.24
CLDND2Q8NHS1 RNY4P16-201ENST00000364768 94 ntBASIC1.04□□□□□ -2.24
CLDND2Q8NHS1 RNU6-757P-201ENST00000410334 100 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms