Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC012468.1-201ENST00000604888 430 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 SDR42E1P4-201ENST00000620894 481 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AL161912.2-201ENST00000565707 3007 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 RNU6-212P-201ENST00000362642 104 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 Y_RNA.143-201ENST00000363520 106 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 RNU4-9P-201ENST00000364951 139 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 U8.11-201ENST00000384699 133 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 U8.12-201ENST00000384701 133 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 MIR3074-201ENST00000384885 81 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 FTH1P15-201ENST00000406984 280 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AL035423.1-201ENST00000420331 213 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AC099548.1-201ENST00000421443 426 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AC009296.1-201ENST00000443146 155 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AC125238.1-201ENST00000448842 249 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AC006026.2-201ENST00000457376 180 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 U8.18-201ENST00000459285 133 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 RPS27AP10-201ENST00000496103 208 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 HMGB3P17-201ENST00000504195 649 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 RNU6-581P-201ENST00000516214 105 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AP002770.2-201ENST00000543613 532 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 SYF2P1-201ENST00000550658 413 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AL137849.1-201ENST00000604767 169 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AL110115.1-201ENST00000614396 364 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AC011476.5-201ENST00000615594 130 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AC243829.7-201ENST00000633081 225 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 AL034408.1-202ENST00000636088 415 ntBASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TRIM48Q8IWZ4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
TRIM48Q8IWZ4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM48Q8IWZ4 Y_RNA.84-201ENST00000363011 104 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-270P-201ENST00000364131 105 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 RNU1-100P-201ENST00000365255 165 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 SNORA5A-201ENST00000384111 134 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 MIR32-201ENST00000384965 70 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 RNU2-25P-201ENST00000411041 191 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 RAB9AP3-201ENST00000412737 573 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 RAB9AP1-201ENST00000449393 573 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 AC025465.3-201ENST00000510570 311 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 RAC1P2-201ENST00000511164 579 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 RN7SKP18-201ENST00000516005 275 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 RNA5SP208-201ENST00000516156 78 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 RNU1-95P-201ENST00000516357 160 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 RNU1-128P-201ENST00000516704 160 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 AC007375.1-201ENST00000554513 578 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 AC090877.1-201ENST00000561418 344 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 AC023824.2-201ENST00000566185 400 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 AC136932.1-201ENST00000574771 208 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 AL451007.1-201ENST00000595491 289 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 AL109918.3-201ENST00000603072 338 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 SNORA62.6-201ENST00000606322 83 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 MIR6134-201ENST00000617606 109 ntBASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM48Q8IWZ4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 Y_RNA.439-201ENST00000384119 94 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 Y_RNA.562-201ENST00000384695 113 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 RNA5SP424-201ENST00000390988 115 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 MIR888-201ENST00000401186 77 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 HLFP1-201ENST00000402375 499 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 TMEM167AP1-201ENST00000423409 219 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 SDAD1P3-201ENST00000427380 333 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 RNA5SP310-201ENST00000459084 116 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 RN7SL93P-201ENST00000463035 293 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 RNU6-1023P-201ENST00000516137 106 ntBASIC3.64□□□□□ -1.83
TRIM48Q8IWZ4 IGKV2-23-201ENST00000518729 323 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms